RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 TRIM56Q9BRZ2 755 aaKnown RBP15.3■□□□□ 0.04
CNOT9-205ENST00000433439 SPATA16Q9BXB7 569 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 SAYSD1Q9NPB0 183 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 GDF3Q9NR23 364 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 MTRF1LQ9UGC7 380 aaKnown RBP15.3■□□□□ 0.04
CNOT9-205ENST00000433439 NFU1Q9UMS0 254 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 DMTF1Q9Y222 760 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 SLCO1B1Q9Y6L6 691 aa15.3■□□□□ 0.04
CNOT9-205ENST00000433439 PRAMEF26H0Y7S4 382 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 H0Y8X5 98 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 K7ESM1 405 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 FPGTO14772 594 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 PPFIA2O75334 1257 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 IGFALSP35858 605 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 ELK3P41970 407 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 GPR1P46091 355 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 SKIDA1Q1XH10 827 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 ERCC6LQ2NKX8 1250 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 ESRP1Q6NXG1 681 aaKnown RBP15.29■□□□□ 0.04
CNOT9-205ENST00000433439 LAYNQ6UX15 382 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 ZBED8Q8IZ13 594 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 NRSN1Q8IZ57 195 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 PELI3Q8N2H9 469 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 ASB12Q8WXK4 309 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 ZC3H10Q96K80 434 aaKnown RBP15.29■□□□□ 0.04
CNOT9-205ENST00000433439 SIGLEC10Q96LC7 697 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 TBATAQ96M53 351 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 AGAP2Q99490 1192 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 KLF6Q99612 283 aaPredicted RBP15.29■□□□□ 0.04
CNOT9-205ENST00000433439 SUDS3Q9H7L9 328 aaPredicted RBP15.29■□□□□ 0.04
CNOT9-205ENST00000433439 RAD18Q9NS91 495 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 ZDHHC18Q9NUE0 388 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 NLE1Q9NVX2 485 aaPredicted RBP15.29■□□□□ 0.04
CNOT9-205ENST00000433439 SOX13Q9UN79 622 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 SDK1Q7Z5N4 2213 aa15.29■□□□□ 0.04
CNOT9-205ENST00000433439 CACNA1AO00555 2505 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 GLYATL1P3A0A0U1RQE8 302 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 POM121BA6NF01 834 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 MROH6A6NGR9 719 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 BHMG1C9JSJ3 638 aaPredicted RBP15.28■□□□□ 0.04
CNOT9-205ENST00000433439 INPP4BO15327 924 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 NUDT1P36639 197 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 HADHAP40939 763 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 ARSDP51689 593 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 TUBB4BP68371 445 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 PRAMEP78395 509 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 CUL1Q13616 776 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 INPP5AQ14642 412 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 FASTKD3Q14CZ7 662 aaKnown RBP15.28■□□□□ 0.04
CNOT9-205ENST00000433439 CHRNA6Q15825 494 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 SPDYCQ5MJ68 293 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 CAPN12Q6ZSI9 719 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 NLRP9Q7RTR0 991 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 PTAR1Q7Z6K3 402 aaPredicted RBP15.28■□□□□ 0.04
CNOT9-205ENST00000433439 IGDCC3Q8IVU1 814 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 GSPT2Q8IYD1 628 aaKnown RBP15.28■□□□□ 0.04
CNOT9-205ENST00000433439 FBXO36Q8NEA4 188 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 OR6P1Q8NGX9 317 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 HDAC10Q969S8 669 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 CENPTQ96BT3 561 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 MFSD3Q96ES6 412 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 ORAI3Q9BRQ5 295 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 KIFC1Q9BW19 673 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 IRF2BPLQ9H1B7 796 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 FAM96AQ9H5X1 160 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 ANKZF1Q9H8Y5 726 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 TM9SF3Q9HD45 589 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 IL26Q9NPH9 171 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 SMG5Q9UPR3 1016 aaKnown RBP15.28■□□□□ 0.04
CNOT9-205ENST00000433439 RPS6KL1Q9Y6S9 549 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 PLXNA2O75051 1894 aa15.28■□□□□ 0.04
CNOT9-205ENST00000433439 MAGEB16A2A368 324 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 RGSL1A5PLK6 1076 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 OR51F1A6NGY5 319 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 C10orf142B7Z368 130 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 BCAT2O15382 392 aaPredicted RBP15.27■□□□□ 0.04
CNOT9-205ENST00000433439 GPR39O43194 453 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 MC4RP32245 332 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 CCDC6Q16204 474 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 ZRANB3Q5FWF4 1079 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 ZDHHC20Q5W0Z9 365 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 PNCKQ6P2M8 343 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 GCNT7Q6ZNI0 430 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 OTUD6BQ8N6M0 293 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 DENND6BQ8NEG7 585 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 PTCD2Q8WV60 388 aaKnown RBP15.27■□□□□ 0.04
CNOT9-205ENST00000433439 DNASE2BQ8WZ79 361 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 CDKN2AIPNLQ96HQ2 116 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 BMFQ96LC9 184 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 LENG8Q96PV6 779 aaPredicted RBP15.27■□□□□ 0.04
CNOT9-205ENST00000433439 FMO2Q99518 471 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 EBNA1BP2Q99848 306 aaKnown RBP15.27■□□□□ 0.04
CNOT9-205ENST00000433439 MRM3Q9HC36 420 aaKnown RBP15.27■□□□□ 0.04
CNOT9-205ENST00000433439 TMEM74BQ9NUR3 256 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 KCTD5Q9NXV2 234 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 ZC3H7BQ9UGR2 993 aaKnown RBP15.27■□□□□ 0.04
CNOT9-205ENST00000433439 OR1A2Q9Y585 309 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 SLC30A1Q9Y6M5 507 aa15.27■□□□□ 0.04
CNOT9-205ENST00000433439 SCN8AQ9UQD0 1980 aa15.27■□□□□ 0.03
CNOT9-205ENST00000433439 SPAG17Q6Q759 2223 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms