RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 MTMR12Q9C0I1 747 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 ADAMTS10Q9H324 1103 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 RNPEPQ9H4A4 650 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 JPH1Q9HDC5 661 aaPredicted RBP8.07□□□□□ -1.12
VTI1A-202ENST00000432306 OLA1Q9NTK5 396 aaKnown RBP8.07□□□□□ -1.12
VTI1A-202ENST00000432306 GPRC5BQ9NZH0 403 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 LAMP5Q9UJQ1 280 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 SLC13A4Q9UKG4 626 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 COQ6Q9Y2Z9 468 aa8.07□□□□□ -1.12
VTI1A-202ENST00000432306 TMEM265A0A087WTH1 108 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 A0A087WV62 115 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 WDR27A2RRH5 827 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PSMD12O00232 456 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 NPHS1O60500 1241 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 SUPT3HO75486 399 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 CPNE6O95741 557 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 POLBP06746 335 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ASNSP08243 561 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PDGFRAP16234 1089 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ICAM3P32942 547 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 TCF7P36402 384 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PLA2G5P39877 138 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 HNF4AP41235 474 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 GLUD2P49448 558 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 NME5P56597 212 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ACTR2P61160 394 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 SMAD3P84022 425 aaKnown RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 STX5Q13190 355 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 LRP8Q14114 963 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PTK2BQ14289 1009 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 SLC36A3Q495N2 470 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 CCDC14Q49A88 953 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PPM1LQ5SGD2 360 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 FAM102AQ5T9C2 384 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 KRT80Q6KB66 452 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 FAM45BPQ6NSW5 357 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 LCLAT1Q6UWP7 414 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 CEP68Q76N32 757 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ZDHHC17Q8IUH5 632 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PSTKQ8IV42 348 aaKnown RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 SLC15A3Q8IY34 581 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 GALNT4Q8N4A0 578 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 DCLK2Q8N568 766 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ANKRD52Q8NB46 1076 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 MINDY2Q8NBR6 621 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ZNF280CQ8ND82 737 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ZMIZ2Q8NF64 920 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 FAM45AQ8TCE6 357 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ZUFSPQ96AP4 578 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 FAM122AQ96E09 287 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 TMEM176AQ96HP8 235 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 SLC45A3Q96JT2 553 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PPP1R16BQ96T49 567 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 TMEM79Q9BSE2 394 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 TCHPQ9BT92 498 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 SNRNP25Q9BV90 132 aaKnown RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 NPLQ9BXD5 320 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 C1QTNF1Q9BXJ1 281 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 NMRAL1Q9HBL8 299 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 MAGEE1Q9HCI5 957 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PFDN4Q9NQP4 134 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 EBF1Q9UH73 591 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 SH3BGRL2Q9UJC5 107 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 CDYLQ9Y232 598 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ANGPTL3Q9Y5C1 460 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PSAT1Q9Y617 370 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 USP3Q9Y6I4 520 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 DOCK5Q9H7D0 1870 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 TRBV23-1A0A0A0MS06 115 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 A6NLC8 198 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 AQP12BA6NM10 295 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 SPATA31C2B4DYI2 1134 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 H3BMQ9 156 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 GAS2O43903 313 aaKnown RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 TSPAN3O60637 253 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ADAM23O75077 832 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 IL18RAPO95256 599 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 SBK3P0C264 359 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 MCF2P10911 925 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 CYP2F1P24903 491 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 GRIA1P42261 906 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ATP4BP51164 291 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 TMBIM6P55061 237 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PSME3P61289 254 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 GALNT1Q10472 559 aaPredicted RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 FAPQ12884 760 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ZBTB17Q13105 803 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ART3Q13508 389 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 TUBA3CQ13748 450 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ODF1Q14990 250 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 CYTH1Q15438 398 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ZYXQ15942 572 aaKnown RBP8.06□□□□□ -1.12
VTI1A-202ENST00000432306 KIZQ2M2Z5 673 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ANKDD1AQ495B1 522 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PKDCCQ504Y2 493 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 PPM1JQ5JR12 505 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 C6orf10Q5SRN2 563 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 ARHGEF16Q5VV41 709 aa8.06□□□□□ -1.12
VTI1A-202ENST00000432306 NANOGP8Q6NSW7 305 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms