RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 NCKIPSDQ9NZQ3 722 aa19.51■□□□□ 0.71
VRK2-205ENST00000432057 IL17CQ9P0M4 197 aa19.51■□□□□ 0.71
VRK2-205ENST00000432057 PLXNB3Q9ULL4 1909 aa19.51■□□□□ 0.71
VRK2-205ENST00000432057 C2orf16Q68DN1 1984 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 H7C0S8 307 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 GRID2O43424 1007 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 HTRA2O43464 458 aaPredicted RBP19.5■□□□□ 0.71
VRK2-205ENST00000432057 IPO13O94829 963 aaKnown RBP19.5■□□□□ 0.71
VRK2-205ENST00000432057 KCNC1P48547 511 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 SETMARQ53H47 684 aaPredicted RBP19.5■□□□□ 0.71
VRK2-205ENST00000432057 SEL1L3Q68CR1 1132 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 RPS27LQ71UM5 84 aaKnown RBP19.5■□□□□ 0.71
VRK2-205ENST00000432057 PAF1Q8N7H5 531 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 EXT2Q93063 718 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 CCDC126Q96EE4 140 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 PHF21BQ96EK2 531 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 PPP1R36Q96LQ0 422 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 OR52B2Q96RD2 323 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 CCDC68Q9H2F9 335 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 TAGLN3Q9UI15 199 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 FAM50BQ9Y247 325 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 PKP3Q9Y446 797 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 ANKRD12Q6UB98 2062 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 GOLGA8QA0A0J9YX86 632 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 GOLGA8OA6NCC3 632 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 C5orf67F2Z3F1 127 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 GOLGA8NF8WBI6 632 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 HDAC3O15379 428 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 OR1I1O60431 355 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 PENKP01210 267 aaPredicted RBP19.5■□□□□ 0.71
VRK2-205ENST00000432057 HOXA9P31269 272 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 XIAPP98170 497 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 KDSRQ06136 332 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 RIPK1Q13546 671 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 ZNF77Q15935 545 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 PTPRNQ16849 979 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 PRSS36Q5K4E3 855 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 METTL3Q86U44 580 aaKnown RBP19.5■□□□□ 0.71
VRK2-205ENST00000432057 OR2AP1Q8NGE2 309 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 FBXO27Q8NI29 283 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 BBS2Q9BXC9 721 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 ATP13A3Q9H7F0 1226 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 TAS2R1Q9NYW7 299 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 SORCS3Q9UPU3 1222 aa19.5■□□□□ 0.71
VRK2-205ENST00000432057 A0A0J9YYE9 177 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 TMEM233B4DJY2 109 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 E9PBE3 544 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 H3BMM5 538 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 NEMP1O14524 444 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 PER2O15055 1255 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 GYG2O15488 501 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 KLHL41O60662 606 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 SOCS5O75159 536 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 TRBC1P01850 177 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 HNRNPLP14866 589 aaKnown RBP eCLIP19.49■□□□□ 0.714e-6■■■■□ 19.4
VRK2-205ENST00000432057 AOC1P19801 751 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 NCF2P19878 526 aaPredicted RBP19.49■□□□□ 0.71
VRK2-205ENST00000432057 MAPK8P45983 427 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 TTPAP49638 278 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 HK2P52789 917 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 OR4D1Q15615 310 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 C22orf39Q6P5X5 142 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 RTL10Q7L3V2 364 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 GRASPQ7Z6J2 395 aaPredicted RBP19.49■□□□□ 0.71
VRK2-205ENST00000432057 TEX9Q8N6V9 391 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 FAM13CQ8NE31 585 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 ING5Q8WYH8 240 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 ZSWIM3Q96MP5 696 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 BIRC8Q96P09 236 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 GPR21Q99679 349 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 OSBPL1AQ9BXW6 950 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 LINC00597Q9H2U6 94 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 TAS2R13Q9NYV9 303 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 GTSE1Q9NYZ3 720 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 HCFC2Q9Y5Z7 792 aa19.49■□□□□ 0.71
VRK2-205ENST00000432057 F8W8V4 182 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 BNIP3LO60238 219 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 XYLBO75191 536 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 JUNP05412 331 aaKnown RBP19.48■□□□□ 0.71
VRK2-205ENST00000432057 HMGCLP35914 325 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 RPL26P61254 145 aaKnown RBP19.48■□□□□ 0.71
VRK2-205ENST00000432057 SLC20A2Q08357 652 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 CTSL3PQ5NE16 218 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 PAQR3Q6TCH7 311 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 ZSWIM9Q86XI8 627 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 SLC22A9Q8IVM8 553 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 CNDP1Q96KN2 507 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 NUF2Q9BZD4 464 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 WDR55Q9H6Y2 383 aaPredicted RBP19.48■□□□□ 0.71
VRK2-205ENST00000432057 TCF7L2Q9NQB0 619 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.48■□□□□ 0.71
VRK2-205ENST00000432057 GALPQ9UBC7 116 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 RPL26L1Q9UNX3 145 aaKnown RBP19.48■□□□□ 0.71
VRK2-205ENST00000432057 VPS9D1Q9Y2B5 631 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 C1orf232A0A0U1RR37 186 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 GRXCR1A8MXD5 290 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 B2RBV5 119 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 SPECC1L-ADORA2AF8WAN1 911 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 GSC2O15499 205 aa19.48■□□□□ 0.71
VRK2-205ENST00000432057 NIPSNAP2O75323 286 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms