RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 ILF3Q12906 894 aaKnown RBP eCLIP14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 BOLA3Q53S33 107 aa14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 B4GALNT4Q76KP1 1039 aa14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 PRICKLE2Q7Z3G6 844 aa14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 PIM3Q86V86 326 aa14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 NAGSQ8N159 534 aa14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 OR6C4Q8NGE1 309 aa14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 NSMCE1Q8WV22 266 aa14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 AP2M1Q96CW1 435 aa14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 CCDC74BQ96LY2 380 aa14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 GSDMCQ9BYG8 508 aa14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 ZMYND15Q9H091 742 aa14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 ARFGAP3Q9NP61 516 aa14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 PCDHGA7Q9Y5G6 932 aa14.21□□□□□ -0.14
SMARCE1-205ENST00000431889 IGHV5-10-1A0A0J9YXX1 117 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 SYCE3A1L190 88 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 A8MU76 341 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 J3QKU1 62 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 NUDT21O43809 227 aaKnown RBP14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 HOXC4P09017 264 aaPredicted RBP14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 MYBL1P10243 752 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 CD1CP29017 333 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 TAS2R40P59535 323 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 FANCCQ00597 558 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 PTSQ03393 145 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 EIF3IQ13347 325 aaKnown RBP14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 PIGHQ14442 188 aaPredicted RBP14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 SNAP47Q5SQN1 464 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 MANEAQ5SRI9 462 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 NCBP2-AS2Q69YL0 99 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 USP45Q70EL2 814 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 TECPR1Q7Z6L1 1165 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 CBARPQ8N350 705 aaPredicted RBP14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 KIAA1524Q8TCG1 905 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 SNRNP27Q8WVK2 155 aaKnown RBP14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 TRIM11Q96F44 468 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 SCRN2Q96FV2 425 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 CMKLR1Q99788 373 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 CBX8Q9HC52 389 aa14.2□□□□□ -0.14
SMARCE1-205ENST00000431889 PDE2AO00408 941 aaPredicted RBP14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 SLC28A2O43868 658 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 CLDN7O95471 211 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 ASMTLO95671 621 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 FGF3P11487 239 aaPredicted RBP14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 CSF2RBP32927 897 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 ARSDP51689 593 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 EPHB1P54762 984 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 NIPAL4Q0D2K0 466 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 DPYSL3Q14195 570 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 CCDC122Q5T0U0 273 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 ZNF648Q5T619 568 aaPredicted RBP14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 KDELC2Q7Z4H8 507 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 BBS5Q8N3I7 341 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 LPCAT1Q8NF37 534 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 FUCA2Q9BTY2 467 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 RIOK2Q9BVS4 552 aaKnown RBP14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 PACSIN1Q9BY11 444 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 CEP41Q9BYV8 373 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 BRD8Q9H0E9 1235 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 RBM22Q9NW64 420 aaKnown RBP eCLIP14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 SLC17A4Q9Y2C5 497 aa14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 OAS3Q9Y6K5 1087 aaKnown RBP14.19□□□□□ -0.14
SMARCE1-205ENST00000431889 B8ZZF3 427 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 TMX2-CTNND1H3BSU7 103 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 NVLO15381 856 aaKnown RBP14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 CPNE6O95741 557 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 SLC4A1P02730 911 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 HLA-DQB2P05538 268 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 LIPCP11150 499 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 PNLIPP16233 465 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 GARSP41250 739 aaKnown RBP14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 GBE1Q04446 702 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 TSR1Q2NL82 804 aaKnown RBP14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 ZFYVE27Q5T4F4 411 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 HTR3CQ8WXA8 447 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 SGF29Q96ES7 293 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 MED8Q96G25 268 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 ARHGAP9Q9BRR9 750 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 OCIAD1Q9NX40 245 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 IP6K2Q9UHH9 426 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 ZNHIT2Q9UHR6 403 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 PCDHGA4Q9Y5G9 962 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 AHCTF1Q8WYP5 2266 aa14.18□□□□□ -0.14
SMARCE1-205ENST00000431889 FZD6O60353 706 aa14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 CYP1A2P05177 515 aa14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 SERPINB6P35237 376 aa14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 HSPA9P38646 679 aaKnown RBP14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 MAPK9P45984 424 aa14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 ARSEP51690 589 aa14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 UBASH3AP57075 661 aa14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 SLC10A2Q12908 348 aaPredicted RBP14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 NFATC2Q13469 925 aa14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 ANKRD20A8PQ5CZ79 823 aa14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 CHST15Q7LFX5 561 aaPredicted RBP14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 C17orf82Q86X59 251 aaPredicted RBP14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 FAM129CQ86XR2 697 aa14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 TEX26Q8N6G2 289 aa14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 KCTD6Q8NC69 237 aa14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 TEKT4Q8WW24 435 aa14.17□□□□□ -0.14
SMARCE1-205ENST00000431889 ART4Q93070 314 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms