RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 RHOJQ9H4E5 214 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 SUDS3Q9H7L9 328 aaPredicted RBP18.2■□□□□ 0.5
HMGN1-206ENST00000431390 FBRSQ9HAH7 460 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 PCDH12Q9NPG4 1184 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 CATSPERZQ9NTU4 200 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 FKBPLQ9UIM3 349 aa18.2■□□□□ 0.5
HMGN1-206ENST00000431390 HMX2A2RU54 273 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 OR51F1A6NGY5 319 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 MAN2B1O00754 1011 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 CD3EAPO15446 510 aaKnown RBP18.19■□□□□ 0.5
HMGN1-206ENST00000431390 SYNCRIPO60506 623 aaKnown RBP18.19■□□□□ 0.5
HMGN1-206ENST00000431390 IL1BP01584 269 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 MT-ND3P03897 115 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 ITGA2BP08514 1039 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 OGNP20774 298 aaKnown RBP18.19■□□□□ 0.5
HMGN1-206ENST00000431390 LHCGRP22888 699 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 PPP2R2AP63151 447 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 CTBP1Q13363 440 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 ZDHHC20Q5W0Z9 365 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 ERAP2Q6P179 960 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 DPPA4Q7L190 304 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 ARFGAP2Q8N6H7 521 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 IL17RCQ8NAC3 791 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 ARRDC3Q96B67 414 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 RSPH9Q9H1X1 276 aaPredicted RBP18.19■□□□□ 0.5
HMGN1-206ENST00000431390 BPIFA1Q9NP55 256 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 DYRK4Q9NR20 520 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 APPL1Q9UKG1 709 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 R4GN57 208 aa18.19■□□□□ 0.5
HMGN1-206ENST00000431390 F5P12259 2224 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 A0A0U1RQS6 177 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 A0A1W2PPM1 405 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 SHISA7A6NL88 538 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 RNASEH1O60930 286 aaKnown RBP18.18■□□□□ 0.5
HMGN1-206ENST00000431390 AHSGP02765 367 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 MC4RP32245 332 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 FOXN2P32314 431 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 HPDP32754 393 aaPredicted RBP18.18■□□□□ 0.5
HMGN1-206ENST00000431390 WASP42768 502 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 LEPRP48357 1165 aaKnown RBP18.18■□□□□ 0.5
HMGN1-206ENST00000431390 PTSQ03393 145 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 PEX6Q13608 980 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 BMPR2Q13873 1038 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 ARHGEF7Q14155 803 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 STARD3Q14849 445 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 HSF5Q4G112 596 aaPredicted RBP18.18■□□□□ 0.5
HMGN1-206ENST00000431390 FASTKD1Q53R41 847 aaKnown RBP18.18■□□□□ 0.5
HMGN1-206ENST00000431390 C2orf27AQ580R0 203 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 MROH9Q5TGP6 573 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 KDM7AQ6ZMT4 941 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 ZC3HC1Q86WB0 502 aaKnown RBP18.18■□□□□ 0.5
HMGN1-206ENST00000431390 MMAAQ8IVH4 418 aaKnown RBP18.18■□□□□ 0.5
HMGN1-206ENST00000431390 OTUD6BQ8N6M0 293 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 VPS39Q96JC1 886 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 SMC6Q96SB8 1091 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 TBC1D17Q9HA65 648 aa18.18■□□□□ 0.5
HMGN1-206ENST00000431390 SSU72Q9NP77 194 aaKnown RBP18.18■□□□□ 0.5
HMGN1-206ENST00000431390 FOXO6A8MYZ6 492 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 ADH1BP00325 375 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 LMNAP02545 664 aaKnown RBP18.17■□□□□ 0.5
HMGN1-206ENST00000431390 GABRB3P28472 473 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 SPAM1P38567 509 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 MMP12P39900 470 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 CD151P48509 253 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 NEK3P51956 506 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 STC1P52823 247 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 XIAPP98170 497 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 MPP1Q00013 466 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 ELP6Q0PNE2 266 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 MLF2Q15773 248 aaPredicted RBP18.17■□□□□ 0.5
HMGN1-206ENST00000431390 TYSND1Q2T9J0 566 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 POM121L1PQ3SYA9 428 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 LRRC73Q5JTD7 316 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 FBXL19Q6PCT2 694 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 SDCCAG8Q86SQ7 713 aaPredicted RBP18.17■□□□□ 0.5
HMGN1-206ENST00000431390 RAVER1Q8IY67 606 aaKnown RBP18.17■□□□□ 0.5
HMGN1-206ENST00000431390 OR2T3Q8NH03 318 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 ISL2Q96A47 359 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 RAB7BQ96AH8 199 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 ALKBH8Q96BT7 664 aaKnown RBP18.17■□□□□ 0.5
HMGN1-206ENST00000431390 TCF12Q99081 682 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 HDAC8Q9BY41 377 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 MARCH4Q9P2E8 410 aaPredicted RBP18.17■□□□□ 0.5
HMGN1-206ENST00000431390 A8MX80 341 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 KLF8O95600 359 aaPredicted RBP18.17■□□□□ 0.5
HMGN1-206ENST00000431390 C1SP09871 688 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 ADRB3P13945 408 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 BRAFP15056 766 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 BPIP17213 487 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 PSMD8P48556 350 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 POLD2P49005 469 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 SATB1Q01826 763 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 CACNG1Q06432 222 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 RALGDSQ12967 914 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 CCINQ13939 588 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 AARS2Q5JTZ9 985 aaKnown RBP18.17■□□□□ 0.5
HMGN1-206ENST00000431390 ERN2Q76MJ5 926 aaKnown RBP18.17■□□□□ 0.5
HMGN1-206ENST00000431390 SERAC1Q96JX3 654 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 GPR22Q99680 433 aa18.17■□□□□ 0.5
HMGN1-206ENST00000431390 CNOT10Q9H9A5 744 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms