RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 TUBB3Q13509 450 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 HNF4GQ14541 408 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 PRR5LQ6MZQ0 368 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 PNCKQ6P2M8 343 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 TMEM26Q6ZUK4 368 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 GIMAP1Q8WWP7 306 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 COMMD9Q9P000 198 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 FNDC3AQ9Y2H6 1198 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 SCAMP1O15126 338 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 SNRPB2P08579 225 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 HMBOX1Q6NT76 420 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 CDC42EP5Q6NZY7 148 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 UGT2A3Q6UWM9 527 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 TMPRSS11AQ6ZMR5 421 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 RNF149Q8NC42 400 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 OR10T2Q8NGX3 314 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 SLC5A5Q92911 643 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 C1QTNF1Q9BXJ1 281 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 TCF7L1Q9HCS4 588 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 PGAP2Q9UHJ9 254 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 ABCA1O95477 2261 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 PSMD11O00231 422 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 MBL2P11226 248 aaPredicted RBP7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 HLA-EP13747 358 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 HSD17B4P51659 736 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 HK3P52790 923 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 UGT3A2Q3SY77 523 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 XRRA1Q6P2D8 792 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 SLC2A7Q6PXP3 512 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 RAB11FIP2Q7L804 512 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 SLC44A1Q8WWI5 657 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 LPAR1Q92633 364 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 MSANTD3Q96H12 275 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 C7orf50Q9BRJ6 194 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 SAV1Q9H4B6 383 aaPredicted RBP7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 AP4E1Q9UPM8 1137 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 DNAJC16Q9Y2G8 782 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 LYVE1Q9Y5Y7 322 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 MRASO14807 208 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 MYL12BO14950 172 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 STOMP27105 288 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 SSTR1P30872 391 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 TARDBPQ13148 414 aaKnown RBP eCLIP7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 PLD1Q13393 1074 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 Q3C1V9 767 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 SPANXN3Q5MJ09 141 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 PET117Q6UWS5 81 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 ERMP1Q7Z2K6 904 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 RIOX2Q8IUF8 465 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 METTL25Q8N6Q8 603 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 OR6P1Q8NGX9 317 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 MED15Q96RN5 788 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 ZSCAN5AQ9BUG6 496 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 XPNPEP3Q9NQH7 507 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 RNF146Q9NTX7 359 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 TNS2Q63HR2 1409 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 RNF225M0QZC1 329 aaPredicted RBP7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 SLC30A4O14863 429 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 EPHB6O15197 1021 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 SCELO95171 688 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 RPL3P39023 403 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 SULT1E1P49888 294 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 PITPNAQ00169 270 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 NFATC3Q12968 1075 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 TMEM132DQ14C87 1099 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 FXNQ16595 210 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 SMIM5Q71RC9 77 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 BEND5Q7L4P6 421 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 ZZZ3Q8IYH5 903 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 PNMA5Q96PV4 448 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 QRSL1Q9H0R6 528 aaKnown RBP7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 ACOT9Q9Y305 439 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 PCDHB12Q9Y5F1 795 aa7.52□□□□□ -1.21
SYNPO2-202ENST00000429713 COL5A2P05997 1499 aaPredicted RBP7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 CNTNAP1P78357 1384 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 ADAMDEC1O15204 470 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 RAB2AP61019 212 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 COL28A1Q2UY09 1125 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 METAP1DQ6UB28 335 aaPredicted RBP7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 DPP9Q86TI2 863 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 HEPHQ9BQS7 1158 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 MTMR12Q9C0I1 747 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 WDR26Q9H7D7 661 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 RDH8Q9NYR8 311 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 SSR3Q9UNL2 185 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 RUVBL1Q9Y265 456 aaKnown RBP7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 FARP1Q9Y4F1 1045 aaPredicted RBP7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 MITFO75030 526 aaPredicted RBP7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 BANF1O75531 89 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 SMIM6P0DI80 62 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 CXCR4P61073 352 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 GAD2Q05329 585 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 E2F2Q14209 437 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 FASTKQ14296 549 aaKnown RBP7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 XKR3Q5GH77 459 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 RNASEH2BQ5TBB1 312 aaKnown RBP7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 PAMR1Q6UXH9 720 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 UBQLNLQ8IYU4 475 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 EFHBQ8N7U6 833 aa7.51□□□□□ -1.21
SYNPO2-202ENST00000429713 NT5C1AQ9BXI3 368 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms