RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 K7ENP7 123 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 FZD6O60353 706 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 PROSCO94903 275 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 ECEL1O95672 775 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 SOD1P00441 154 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 FGF1P05230 155 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 ALDH4A1P30038 563 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 ADCY8P40145 1251 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 ETV5P41161 510 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 MAPK10P53779 464 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 OR1D5P58170 312 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 CTBSQ01459 385 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 ZFP36L1Q07352 338 aaKnown RBP17.02■□□□□ 0.32
TRIM39-209ENST00000428728 LY6DQ14210 128 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 IFI16Q16666 785 aaKnown RBP17.02■□□□□ 0.32
TRIM39-209ENST00000428728 INO80CQ6PI98 192 aaPredicted RBP17.02■□□□□ 0.32
TRIM39-209ENST00000428728 MARK2Q7KZI7 788 aaKnown RBP17.02■□□□□ 0.32
TRIM39-209ENST00000428728 SLITRK4Q8IW52 837 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 CTNNBL1Q8WYA6 563 aaPredicted RBP17.02■□□□□ 0.32
TRIM39-209ENST00000428728 MAML1Q92585 1016 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 SCAMP4Q969E2 229 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 CDH19Q9H159 772 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 SEMA6CQ9H3T2 930 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 RBM22Q9NW64 420 aaKnown RBP eCLIP17.02■□□□□ 0.32
TRIM39-209ENST00000428728 NENFQ9UMX5 172 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 SLC17A4Q9Y2C5 497 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 SSUH2Q9Y2M2 353 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 TMEM98Q9Y2Y6 226 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 PLEKHM1Q9Y4G2 1056 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 PCDHGA7Q9Y5G6 932 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 ST14Q9Y5Y6 855 aa17.02■□□□□ 0.32
TRIM39-209ENST00000428728 COL6A6A6NMZ7 2263 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 PRAMEF33A0A0G2JMD5 474 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 A0A0J9YYE9 177 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 CAPN8A6NHC0 703 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 MATN3O15232 486 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 INPP4BO15327 924 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 PRAMEF10O60809 474 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 TRBC1P01850 177 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 HLA-DQB2P05538 268 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 IVLP07476 585 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 ZNF30P17039 623 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 TEAD1P28347 426 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 ACTR1BP42025 376 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 ACTR1AP61163 376 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 B4GALNT1Q00973 533 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 GBE1Q04446 702 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 DPTQ07507 201 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 IHHQ14623 411 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 TGIF1Q15583 401 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 ALG1LQ6GMV1 187 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 ADAMTSL4Q6UY14 1074 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 LPCAT1Q8NF37 534 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 SNRNP27Q8WVK2 155 aaKnown RBP17.01■□□□□ 0.31
TRIM39-209ENST00000428728 TTC9Q92623 222 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 OR2M4Q96R27 311 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 CCNL2Q96S94 520 aaPredicted RBP17.01■□□□□ 0.31
TRIM39-209ENST00000428728 CMKLR1Q99788 373 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 NUDT22Q9BRQ3 303 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 TDRD1Q9BXT4 1180 aaKnown RBP17.01■□□□□ 0.31
TRIM39-209ENST00000428728 XPO4Q9C0E2 1151 aaKnown RBP17.01■□□□□ 0.31
TRIM39-209ENST00000428728 UVRAGQ9P2Y5 699 aa17.01■□□□□ 0.31
TRIM39-209ENST00000428728 B4GAT1O43505 415 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 CPNE6O95741 557 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 H2AFZP0C0S5 128 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 CA4P22748 312 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 CCNCP24863 283 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 STC1P52823 247 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 PTSQ03393 145 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 SRSF6Q13247 344 aaKnown RBP17■□□□□ 0.31
TRIM39-209ENST00000428728 ATMQ13315 3056 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 C16orf72Q14CZ0 275 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 PDK2Q15119 407 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 USP53Q70EK8 1073 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 H2AFVQ71UI9 128 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 ZNF438Q7Z4V0 828 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 PIM3Q86V86 326 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 C17orf82Q86X59 251 aaPredicted RBP17■□□□□ 0.31
TRIM39-209ENST00000428728 NAGSQ8N159 534 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 PQLC3Q8N755 202 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 CCNYQ8ND76 341 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 AGAP2Q99490 1192 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 RIOK2Q9BVS4 552 aaKnown RBP17■□□□□ 0.31
TRIM39-209ENST00000428728 SEMA4CQ9C0C4 833 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 ZMYND15Q9H091 742 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 ZNF106Q9H2Y7 1883 aaKnown RBP17■□□□□ 0.31
TRIM39-209ENST00000428728 HAUS2Q9NVX0 235 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 FOXJ2Q9P0K8 574 aa17■□□□□ 0.31
TRIM39-209ENST00000428728 GCN1Q92616 2671 aaKnown RBP17■□□□□ 0.31
TRIM39-209ENST00000428728 ASMTLO95671 621 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 KRT7P08729 469 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 NIPAL4Q0D2K0 466 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 ZNF765Q7L2R6 523 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 MAP7D3Q8IWC1 876 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 RCBTB1Q8NDN9 531 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 ARRDC2Q8TBH0 407 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 USP7Q93009 1102 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 TMEM159Q96B96 161 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 FAF2Q96CS3 445 aa16.99■□□□□ 0.31
TRIM39-209ENST00000428728 HDAC11Q96DB2 347 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms