RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 CPA2P48052 419 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 ARFIP2P53365 341 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 AP2B1P63010 937 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 VAC14Q08AM6 782 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 SLC44A4Q53GD3 710 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 STXBP5Q5T5C0 1151 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 LCLAT1Q6UWP7 414 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 Q6ZVU0 165 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 KCNMB4Q86W47 210 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 PCDH20Q8N6Y1 951 aaKnown RBP7.23□□□□□ -1.25
CNOT4-206ENST00000428680 ICA1LQ8NDH6 482 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 SCAMP5Q8TAC9 235 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 FAR1Q8WVX9 515 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 GFM1Q96RP9 751 aaKnown RBP7.23□□□□□ -1.25
CNOT4-206ENST00000428680 B3GNT5Q9BYG0 378 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 VPS45Q9NRW7 570 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 PIH1D1Q9NWS0 290 aaKnown RBP7.23□□□□□ -1.25
CNOT4-206ENST00000428680 CAPN7Q9Y6W3 813 aa7.23□□□□□ -1.25
CNOT4-206ENST00000428680 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.23□□□□□ -1.25
CNOT4-206ENST00000428680 FAM227AF5H4B4 570 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 NPC1O15118 1278 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 DUX1O43812 170 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 SEC22BO75396 215 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 UBXN7O94888 489 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 SEMA4FO95754 770 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 ITGB1P05556 798 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 WNT3AP56704 352 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 PUM1Q14671 1186 aaKnown RBP eCLIP7.22□□□□□ -1.254e-8■■■□□ 18.6
CNOT4-206ENST00000428680 KBTBD12Q3ZCT8 623 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 TMEM220Q6QAJ8 160 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 GDPD4Q6W3E5 623 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 SRLQ86TD4 932 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 DNAAF5Q86Y56 855 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 JPH3Q8WXH2 748 aaPredicted RBP7.22□□□□□ -1.25
CNOT4-206ENST00000428680 C17orf62Q9BQA9 187 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 MRPL1Q9BYD6 325 aaKnown RBP7.22□□□□□ -1.25
CNOT4-206ENST00000428680 WWP1Q9H0M0 922 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 C3orf14Q9HBI5 128 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 NCKIPSDQ9NZQ3 722 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 APOBEC3BQ9UH17 382 aaKnown RBP7.22□□□□□ -1.25
CNOT4-206ENST00000428680 POLG2Q9UHN1 485 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 GPR34Q9UPC5 381 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 CDYLQ9Y232 598 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 SIK3Q9Y2K2 1263 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 PCDHGC4Q9Y5F7 938 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 A0A1B0GTH6 734 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 C5orf60A6NFR6 353 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 PRMT5O14744 637 aaPredicted RBP7.22□□□□□ -1.25
CNOT4-206ENST00000428680 PAK4O96013 591 aaPredicted RBP7.22□□□□□ -1.25
CNOT4-206ENST00000428680 ERBB2P04626 1255 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 RARAP10276 462 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 PRLRP16471 622 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 MC4RP32245 332 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 HPCAL1P37235 193 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 TNFRSF4P43489 277 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 VSNL1P62760 191 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 LMAN2Q12907 356 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 C1orf61Q13536 156 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 PARP6Q2NL67 630 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 MUM1Q2TAK8 710 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 GRAMD1BQ3KR37 738 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 TRIM61Q5EBN2 209 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 EARS2Q5JPH6 523 aaKnown RBP7.22□□□□□ -1.25
CNOT4-206ENST00000428680 HORMAD1Q86X24 394 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 KRT73Q86Y46 540 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 FAM20CQ8IXL6 584 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 ZCCHC9Q8N567 271 aaKnown RBP7.22□□□□□ -1.25
CNOT4-206ENST00000428680 OR56A4Q8NGH8 313 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 ATG4AQ8WYN0 398 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 RIT1Q92963 219 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 PHF21BQ96EK2 531 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 ZDHHC12Q96GR4 267 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 SERPINB12Q96P63 405 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 OR2AG1Q9H205 316 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 CCSER2Q9H7U1 834 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 TBC1D17Q9HA65 648 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 SPHK2Q9NRA0 654 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 KRT84Q9NSB2 600 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 COMMD8Q9NX08 183 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 A0A1W2PP55 124 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 A0A1W2PQJ5 194 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 DYTNA2CJ06 578 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 TGM5O43548 720 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 PPP1R11O60927 126 aaPredicted RBP7.22□□□□□ -1.25
CNOT4-206ENST00000428680 GSNP06396 782 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 SPATA31C1P0DKV0 1188 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 TYRP1P17643 537 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 BUD31P41223 144 aaPredicted RBP7.22□□□□□ -1.25
CNOT4-206ENST00000428680 SKIV2L2P42285 1042 aaKnown RBP7.22□□□□□ -1.25
CNOT4-206ENST00000428680 KLK7P49862 253 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 RBPJQ06330 500 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 XKR6Q5GH73 641 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 HGSNATQ68CP4 663 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 STRADAQ7RTN6 431 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 PIM3Q86V86 326 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 NLRC5Q86WI3 1866 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 MRPL48Q96GC5 212 aaKnown RBP7.22□□□□□ -1.25
CNOT4-206ENST00000428680 HSPA12BQ96MM6 686 aa7.22□□□□□ -1.25
CNOT4-206ENST00000428680 KLF6Q99612 283 aaPredicted RBP7.22□□□□□ -1.25
CNOT4-206ENST00000428680 IL25Q9H293 177 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms