RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 KLHL10Q6JEL2 608 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 CBWD2Q8IUF1 395 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 LIX1LQ8IVB5 337 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 ZBTB8OSQ8IWT0 167 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 TMEM105Q8N8V8 129 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 XXYLT1Q8NBI6 393 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 LMO3Q8TAP4 145 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 DNAJB14Q8TBM8 379 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 PARD3BQ8TEW8 1205 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 CTHRC1Q96CG8 243 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 ZNF668Q96K58 619 aaPredicted RBP5.78□□□□□ -1.48
C9orf3-205ENST00000427193 NAP1L5Q96NT1 182 aaPredicted RBP5.78□□□□□ -1.48
C9orf3-205ENST00000427193 NT5C1BQ96P26 610 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 VN1R3Q9BXE9 311 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 TRIM5Q9C035 493 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 GRPEL1Q9HAV7 217 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 TRIM36Q9NQ86 728 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 PADI3Q9ULW8 664 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 MAFFQ9ULX9 164 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 COQ4Q9Y3A0 265 aa5.78□□□□□ -1.48
C9orf3-205ENST00000427193 CNOT1A5YKK6 2376 aaKnown RBP5.78□□□□□ -1.48
C9orf3-205ENST00000427193 MYH11P35749 1972 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 GTPBP10A4D1E9 387 aaKnown RBP5.77□□□□□ -1.49
C9orf3-205ENST00000427193 LGALS16A8MUM7 142 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 TMEM233B4DJY2 109 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 CETN3O15182 167 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 OGTO15294 1046 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 CLDN3O15551 220 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 CALUO43852 315 aaPredicted RBP5.77□□□□□ -1.49
C9orf3-205ENST00000427193 TMPRSS11DO60235 418 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 TBX10O75333 385 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 CCKARP32238 428 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 DIO1P49895 249 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 LIG4P49917 911 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 AGFG1P52594 562 aaKnown RBP5.77□□□□□ -1.49
C9orf3-205ENST00000427193 ID2Q02363 134 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 SPAG1Q07617 926 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 CYP24A1Q07973 514 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 HYAL1Q12794 435 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 BFSP2Q13515 415 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 PIN1Q13526 163 aaPredicted RBP5.77□□□□□ -1.49
C9orf3-205ENST00000427193 PSMD6Q15008 389 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 SNRNP35Q16560 246 aaKnown RBP5.77□□□□□ -1.49
C9orf3-205ENST00000427193 DCAF12L1Q5VU92 463 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 SLC27A1Q6PCB7 646 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 LRRC8DQ7L1W4 858 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 BRSK2Q8IWQ3 736 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 KIAA2013Q8IYS2 634 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 GPD1LQ8N335 351 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 EEF2KMTQ96G04 330 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 CNOT6LQ96LI5 555 aaKnown RBP5.77□□□□□ -1.49
C9orf3-205ENST00000427193 RIPOR3Q96MK2 946 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 ERGIC2Q96RQ1 377 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 PPP1R9BQ96SB3 815 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 EIF2AQ9BY44 585 aaKnown RBP5.77□□□□□ -1.49
C9orf3-205ENST00000427193 METTL14Q9HCE5 456 aaKnown RBP5.77□□□□□ -1.49
C9orf3-205ENST00000427193 AGO2Q9UKV8 859 aaKnown RBP5.77□□□□□ -1.49
C9orf3-205ENST00000427193 MICAL3Q7RTP6 2002 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 BPTFQ12830 3046 aa5.77□□□□□ -1.49
C9orf3-205ENST00000427193 PTPRJQ12913 1337 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 GCN1Q92616 2671 aaKnown RBP5.76□□□□□ -1.49
C9orf3-205ENST00000427193 ABHD14A-ACY1A0A1B0GW23 586 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 GOLGA6L3A6NEY3 463 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 LRRIQ3A6PVS8 624 aaPredicted RBP5.76□□□□□ -1.49
C9orf3-205ENST00000427193 KCNJ18B7U540 433 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 P4HA2O15460 535 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 CCP110O43303 1012 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 RPS6KA5O75582 802 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 NOL4O94818 638 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 FGFR1OPO95684 399 aaKnown RBP5.76□□□□□ -1.49
C9orf3-205ENST00000427193 LDHAP00338 332 aaKnown RBP5.76□□□□□ -1.49
C9orf3-205ENST00000427193 CLTAP09496 248 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 STAG3L1P0CL83 205 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 GHRP10912 638 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 KCNE1P15382 129 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 IBSPP21815 317 aaPredicted RBP5.76□□□□□ -1.49
C9orf3-205ENST00000427193 CD52P31358 61 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 UQCRC1P31930 480 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 GTF2H1P32780 548 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 THBS4P35443 961 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 TNFSF9P41273 254 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 TIRAPP58753 221 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 ZNF91Q05481 1191 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 BFSP1Q12934 665 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 TBX2Q13207 712 aaPredicted RBP5.76□□□□□ -1.49
C9orf3-205ENST00000427193 KCNJ12Q14500 433 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 KYAT1Q16773 422 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 DCAF4L1Q3SXM0 396 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 ZACNQ401N2 412 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 EPC2Q52LR7 807 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 TMTC4Q5T4D3 741 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 ARMCX5Q6P1M9 558 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 NOTUMQ6P988 496 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 VSTM1Q6UX27 236 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 DCDC5Q6ZRR9 648 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 INTS8Q75QN2 995 aaKnown RBP5.76□□□□□ -1.49
C9orf3-205ENST00000427193 CATSPER4Q7RTX7 472 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 PIP4P1Q86T03 277 aa5.76□□□□□ -1.49
C9orf3-205ENST00000427193 CDR2LQ86X02 465 aaPredicted RBP5.76□□□□□ -1.49
C9orf3-205ENST00000427193 FAM186BQ8IYM0 893 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms