RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 TOE1Q96GM8 510 aaKnown RBP13.4□□□□□ -0.26
PRPF39-202ENST00000424478 RIOK2Q9BVS4 552 aaKnown RBP13.4□□□□□ -0.26
PRPF39-202ENST00000424478 FBXO6Q9NRD1 293 aaPredicted RBP13.4□□□□□ -0.26
PRPF39-202ENST00000424478 PPIL1Q9Y3C6 166 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 NDC80O14777 642 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 SCAMP1O15126 338 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 EIF3HO15372 352 aaKnown RBP eCLIP13.4□□□□□ -0.26
PRPF39-202ENST00000424478 PRAMEF1O95521 474 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 AOC1P19801 751 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 STC1P52823 247 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 SYNPOQ8N3V7 929 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 CXorf40AQ8TE69 158 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 HNRNPLLQ8WVV9 542 aaKnown RBP13.4□□□□□ -0.26
PRPF39-202ENST00000424478 GPR174Q9BXC1 333 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 FUT8Q9BYC5 575 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 FAM129AQ9BZQ8 928 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 FOXP3Q9BZS1 431 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 NLE1Q9NVX2 485 aaPredicted RBP13.4□□□□□ -0.26
PRPF39-202ENST00000424478 MBD1Q9UIS9 605 aaPredicted RBP13.4□□□□□ -0.26
PRPF39-202ENST00000424478 FAM169AQ9Y6X4 670 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 K7ESF4 209 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 RAD51BO15315 384 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 SPINT3P49223 89 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 BMPR2Q13873 1038 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 TRMT10CQ7L0Y3 403 aaKnown RBP13.4□□□□□ -0.26
PRPF39-202ENST00000424478 NDUFAF2Q8N183 169 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 LRRC39Q96DD0 335 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 EBF2Q9HAK2 575 aa13.4□□□□□ -0.26
PRPF39-202ENST00000424478 MBNL1Q9NR56 388 aaKnown RBP13.4□□□□□ -0.26
PRPF39-202ENST00000424478 H0Y8X5 98 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 OR1I1O60431 355 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 RNGTTO60942 597 aaKnown RBP13.39□□□□□ -0.27
PRPF39-202ENST00000424478 ATG13O75143 517 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 RPP40O75818 363 aaKnown RBP13.39□□□□□ -0.27
PRPF39-202ENST00000424478 TUBBP07437 444 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 CYP2A6P11509 494 aaPredicted RBP13.39□□□□□ -0.27
PRPF39-202ENST00000424478 MAOBP27338 520 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 SLC1A2P43004 574 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 XIAPP98170 497 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 ATP13A5Q4VNC0 1218 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 STEAP4Q687X5 459 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 ARMCX6Q7L4S7 300 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 TAS2R42Q7RTR8 314 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 STYXQ8WUJ0 223 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 LYSMD1Q96S90 227 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 SPATA16Q9BXB7 569 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 CRYL1Q9Y2S2 319 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 EXOC1LA0A1B0GW35 172 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 FADS2P1A8MWK0 482 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 PCCBP05166 539 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 SAT1P21673 171 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 GCAP28676 217 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 CLDN2P57739 230 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 SPANXN3Q5MJ09 141 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 LAYNQ6UX15 382 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 SNX19Q92543 992 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 RANBP9Q96S59 729 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 BOCQ9BWV1 1114 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 MOCS1Q9NZB8 636 aa13.39□□□□□ -0.27
PRPF39-202ENST00000424478 DYNC1I1O14576 645 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 FSBPO95073 299 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 BCKDHBP21953 392 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 FNTBP49356 437 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 IFFO1Q0D2I5 559 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 RELL1Q8IUW5 271 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 BTBD1Q9H0C5 482 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 ASB8Q9H765 288 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 HACD3Q9P035 362 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 ZFATQ9P243 1243 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 TMPRSS11EQ9UL52 423 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 NCKAP1Q9Y2A7 1128 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 CACNA1HO95180 2353 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 GPR179Q6PRD1 2367 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 GLYATL1P3A0A0U1RQE8 302 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 WNT9AO14904 365 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 PLRG1O43660 514 aaKnown RBP13.38□□□□□ -0.27
PRPF39-202ENST00000424478 GABRB3P28472 473 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 HSF5Q4G112 596 aaPredicted RBP13.38□□□□□ -0.27
PRPF39-202ENST00000424478 KHDC1Q4VXA5 237 aaKnown RBP13.38□□□□□ -0.27
PRPF39-202ENST00000424478 NEPROQ6NW34 567 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 NAPRTQ6XQN6 538 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 DET1Q7L5Y6 550 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 CYP4X1Q8N118 509 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 OR4L1Q8NH43 312 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 AP2M1Q96CW1 435 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 LENG8Q96PV6 779 aaPredicted RBP13.38□□□□□ -0.27
PRPF39-202ENST00000424478 NDNQ99608 321 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 TSPYL1Q9H0U9 437 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 ITM2CQ9NQX7 267 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 OR1A2Q9Y585 309 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 NFS1Q9Y697 457 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 SRP72O76094 671 aaKnown RBP13.38□□□□□ -0.27
PRPF39-202ENST00000424478 HAUS5O94927 633 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 APBB3O95704 486 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 RPS9P46781 194 aaKnown RBP13.38□□□□□ -0.27
PRPF39-202ENST00000424478 ELP6Q0PNE2 266 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 THOC5Q13769 683 aaKnown RBP13.38□□□□□ -0.27
PRPF39-202ENST00000424478 CEP85LQ5SZL2 805 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 TEDDM1Q5T9Z0 273 aa13.38□□□□□ -0.27
PRPF39-202ENST00000424478 CNSTQ6PJW8 725 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms