RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 CCDC89Q8N998 374 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 GPR26Q8NDV2 337 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 AP2M1Q96CW1 435 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 TBATAQ96M53 351 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 LGR4Q9BXB1 951 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 GPR63Q9BZJ6 419 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 FAM83DQ9H4H8 585 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 RAD18Q9NS91 495 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 GOLGA6AQ9NYA3 693 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 PKD2L2Q9NZM6 624 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 RNF14Q9UBS8 474 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 OR1A2Q9Y585 309 aa18.4■□□□□ 0.54
HDAC6-205ENST00000423941 COL5A1P20908 1838 aaPredicted RBP18.39■□□□□ 0.54
HDAC6-205ENST00000423941 MYLKQ15746 1914 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 TNFRSF10CO14798 259 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 PHF2O75151 1096 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 USP12O75317 370 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 PYGLP06737 847 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 BPIP17213 487 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 CSRP1P21291 193 aaKnown RBP18.39■□□□□ 0.53
HDAC6-205ENST00000423941 EPHA8P29322 1005 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-205ENST00000423941 ACTN2P35609 894 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 TNNT3P45378 269 aaPredicted RBP18.39■□□□□ 0.53
HDAC6-205ENST00000423941 FNTAP49354 379 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 THOP1P52888 689 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 BNIP3Q12983 259 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 SPARCL1Q14515 664 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 PUM1Q14671 1186 aaKnown RBP eCLIP18.39■□□□□ 0.53
HDAC6-205ENST00000423941 FAXCQ5TGI0 409 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 BRSK1Q8TDC3 778 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 COX14Q96I36 57 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 AGAP2Q99490 1192 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 APOL2Q9BQE5 337 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 RIOK2Q9BVS4 552 aaKnown RBP18.39■□□□□ 0.53
HDAC6-205ENST00000423941 RAB6BQ9NRW1 208 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 CD84Q9UIB8 345 aa18.39■□□□□ 0.53
HDAC6-205ENST00000423941 CNOT6Q9ULM6 557 aaKnown RBP18.39■□□□□ 0.53
HDAC6-205ENST00000423941 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.38■□□□□ 0.53
HDAC6-205ENST00000423941 CBFA2T3O75081 653 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 MYCLP1P12525 358 aaPredicted RBP18.38■□□□□ 0.53
HDAC6-205ENST00000423941 PSMA3P25788 255 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 MAGEA6P43360 314 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 CDK3Q00526 305 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 SUZ12Q15022 739 aaKnown RBP18.38■□□□□ 0.53
HDAC6-205ENST00000423941 TAF1AQ15573 450 aaPredicted RBP18.38■□□□□ 0.53
HDAC6-205ENST00000423941 UAP1L1Q3KQV9 507 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 CCDC137Q6PK04 289 aaKnown RBP18.38■□□□□ 0.53
HDAC6-205ENST00000423941 LINC00523Q86TU6 105 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 SLC25A45Q8N413 288 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 BAHD1Q8TBE0 780 aaPredicted RBP18.38■□□□□ 0.53
HDAC6-205ENST00000423941 SLCO2A1Q92959 643 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 SCARF2Q96GP6 870 aaPredicted RBP18.38■□□□□ 0.53
HDAC6-205ENST00000423941 WDR92Q96MX6 357 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 PLEKHG4BQ96PX9 1271 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 FRMD8Q9BZ67 464 aaPredicted RBP18.38■□□□□ 0.53
HDAC6-205ENST00000423941 WDR26Q9H7D7 661 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 CAAP1Q9H8G2 361 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 EIF2B3Q9NR50 452 aaKnown RBP18.38■□□□□ 0.53
HDAC6-205ENST00000423941 DGKBQ9Y6T7 804 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 SPTBN4Q9H254 2564 aa18.38■□□□□ 0.53
HDAC6-205ENST00000423941 TMEM202A6NGA9 273 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 FADS2P1A8MWK0 482 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 PDE2AO00408 941 aaPredicted RBP18.37■□□□□ 0.53
HDAC6-205ENST00000423941 FLRT2O43155 660 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 PPFIA2O75334 1257 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 PIAS2O75928 621 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 FUCA1P04066 466 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 GIMD1P0DJR0 217 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 DGKAP23743 735 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 HTR1BP28222 390 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 GPR1P46091 355 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 HNRNPKP61978 463 aaKnown RBP eCLIP18.37■□□□□ 0.53
HDAC6-205ENST00000423941 ALG11Q2TAA5 492 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 GSTA5Q7RTV2 222 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 HEATR4Q86WZ0 1026 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 BLOC1S5Q8TDH9 187 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 LRRC45Q96CN5 670 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 PHPT1Q9NRX4 125 aaPredicted RBP18.37■□□□□ 0.53
HDAC6-205ENST00000423941 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.37■□□□□ 0.53
HDAC6-205ENST00000423941 PCYOX1Q9UHG3 505 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 CSNK1G3Q9Y6M4 447 aa18.37■□□□□ 0.53
HDAC6-205ENST00000423941 CACNB4O00305 520 aaPredicted RBP18.36■□□□□ 0.53
HDAC6-205ENST00000423941 GAPDHSO14556 408 aaPredicted RBP18.36■□□□□ 0.53
HDAC6-205ENST00000423941 LDB2O43679 373 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 SH3BP5O60239 455 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 CEACAM5P06731 702 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 LPOP22079 712 aaPredicted RBP18.36■□□□□ 0.53
HDAC6-205ENST00000423941 KELP23276 732 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 ID4P47928 161 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 HK3P52790 923 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 CDK16Q00536 496 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 ZNF542PQ5EBM4 170 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 ZDHHC20Q5W0Z9 365 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 KCTD16Q68DU8 428 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 PDPK2PQ6A1A2 396 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 RAET1GQ6H3X3 334 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 ENPP7Q6UWV6 458 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 SYT10Q6XYQ8 523 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 GLT6D1Q7Z4J2 308 aa18.36■□□□□ 0.53
HDAC6-205ENST00000423941 TAB3Q8N5C8 712 aaPredicted RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms