RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 KCNA10Q16322 511 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ACBD5Q5T8D3 534 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TMEM207Q6UWW9 146 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 C17orf99Q6UX52 265 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CD300LGQ6UXG3 332 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 EFL1Q7Z2Z2 1120 aaKnown RBP11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 GLT6D1Q7Z4J2 308 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TICAM1Q8IUC6 712 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CFAP52Q8N1V2 620 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ARRDC2Q8TBH0 407 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 NCSTNQ92542 709 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PEX13Q92968 403 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 C3orf30Q96M34 536 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TCF12Q99081 682 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TFB2MQ9H5Q4 396 aaKnown RBP11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SARS2Q9NP81 518 aaKnown RBP11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TMEM181Q9P2C4 612 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SEPT3Q9UH03 358 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 VPS9D1Q9Y2B5 631 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 LOC285095A0A1B0GVY8 99 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 E5RI56 91 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 H0YJX3 145 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TRIM24O15164 1050 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 BAIAP3O94812 1187 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 EPOP01588 193 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 NELFEP18615 380 aaKnown RBP11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PSMD8P48556 350 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 MAPKAPK2P49137 400 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 NFKB2Q00653 900 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CLCQ05315 142 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 KLHDC10Q6PID8 442 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CAMK1DQ8IU85 385 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 FATE1Q969F0 183 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PNPLA3Q9NST1 481 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 GIMAP2Q9UG22 337 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CNOT6Q9ULM6 557 aaKnown RBP11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 BTN3A1O00481 513 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SEPT4O43236 478 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TLR5O60602 858 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 VPS26AO75436 327 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 OAZ2O95190 189 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 MMP2P08253 660 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ZNF26P17031 533 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SOX11P35716 441 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 KPNA1P52294 538 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 STC1P52823 247 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ATP6V0D1P61421 351 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 BNIP2Q12982 314 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CAPRIN1Q14444 709 aaKnown RBP11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 HABP4Q5JVS0 413 aaKnown RBP11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SLC24A5Q71RS6 500 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SPPL2CQ8IUH8 684 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TEX26Q8N6G2 289 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TRPV1Q8NER1 839 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 RHEBL1Q8TAI7 183 aa11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TRMT13Q9NUP7 481 aaKnown RBP11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TRMT6Q9UJA5 497 aaKnown RBP11.67□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 HNRNPRO43390 633 aaKnown RBP11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 GMNNO75496 209 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ATXN1LP0C7T5 689 aaKnown RBP11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 DSC3Q14574 896 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TMEM259Q4ZIN3 620 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 FBXO48Q5FWF7 155 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 EFHBQ8N7U6 833 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CDKN2AIPNLQ96HQ2 116 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 AARSD1Q9BTE6 412 aaKnown RBP11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ETAA1Q9NY74 926 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 SARDHQ9UL12 918 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PTGDR2Q9Y5Y4 395 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TCRBV3S1A0A5B6 114 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 LRRC14BA6NHZ5 514 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 INPP4BO15327 924 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 H6PDO95479 791 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ALDOCP09972 364 aaKnown RBP11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CHRM3P20309 590 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 OXCT1P55809 520 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 OR4D1Q15615 310 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PTPRNQ16849 979 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 FUT11Q495W5 492 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TTC33Q6PID6 262 aaPredicted RBP11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PAQR3Q6TCH7 311 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 AFTPHQ6ULP2 937 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 OR4K2Q8NGD2 314 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 EXOC2Q96KP1 924 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 ZNF597Q96LX8 424 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 NSUN5Q96P11 429 aaKnown RBP11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 KCNA7Q96RP8 456 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 POPDC3Q9HBV1 291 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 INTS10Q9NVR2 710 aaKnown RBP11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 CD274Q9NZQ7 290 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 UBA2Q9UBT2 640 aaPredicted RBP11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PCDHGB4Q9UN71 923 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 TIMM22Q9Y584 194 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PCDHGB5Q9Y5G0 923 aa11.66□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PPP6CO00743 305 aa11.65□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 PRAMEF11O60813 436 aa11.65□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 FGF4P08620 206 aa11.65□□□□□ -0.54
CSPG4P3Y-201ENST00000418188 GPX3P22352 226 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms