RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 TRIM54Q9BYV2 358 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 C2orf40Q9H1Z8 148 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 TOR3AQ9H497 397 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 PAK1IP1Q9NWT1 392 aaPredicted RBP8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 SEPT10Q9P0V9 454 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 ZNF221Q9UK13 617 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 GPSM3Q9Y4H4 160 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 ATP6AP2A0A1C7CYW4 349 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 ATP6AP2O75787 350 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 HPRP00739 348 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 UBL4AP11441 157 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 TCF3P15923 654 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 NCK1P16333 377 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 GOT1P17174 413 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 SLC26A2P50443 739 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 TSPY1Q01534 308 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 ACOX1Q15067 660 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 CDK10Q15131 360 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 LAIR2Q6ISS4 152 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 PRR23CQ6ZRP0 262 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 DPH6Q7L8W6 267 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 STRADAQ7RTN6 431 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 PAGE2Q7Z2X7 111 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 NT5DC4Q86YG4 428 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 PSTKQ8IV42 348 aaKnown RBP8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 CEP97Q8IW35 865 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 SP8Q8IXZ3 490 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 SPATA6LQ8N4H0 392 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 OR6F1Q8NGZ6 308 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 YIPF6Q96EC8 236 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 CCDC177Q9NQR7 707 aaPredicted RBP8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 FAM118AQ9NWS6 357 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 SLC1A7O00341 560 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 KRT6AP02538 564 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 KRT6BP04259 564 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 PFKMP08237 780 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 KCNA2P16389 499 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 CAP2P40123 477 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 SEPHS1P49903 392 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 CLCNKBP51801 687 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 LSM3P62310 102 aaKnown RBP8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 SLC6A3Q01959 620 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 TNFAIP2Q03169 654 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 EMX1Q04741 257 aaPredicted RBP8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 CD47Q08722 323 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 GALNT1Q10472 559 aaPredicted RBP8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 KIF19Q2TAC6 998 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 CERCAMQ5T4B2 595 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 AGAP6Q5VW22 663 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 TUBA3EQ6PEY2 450 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 LCLAT1Q6UWP7 414 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 P2RY8Q86VZ1 359 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 RALGPS2Q86X27 583 aaPredicted RBP8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 CLEC4FQ8N1N0 589 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 SIMC1Q8NDZ2 872 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 AGAP4Q96P64 663 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 SEPHS2Q99611 448 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 ASPSCR1Q9BZE9 553 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 CLPBQ9H078 707 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 SIX4Q9UIU6 781 aa8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 COL2A1P02458 1487 aaPredicted RBP8.01□□□□□ -1.13
HMGXB4-202ENST00000418170 UBXN8O00124 270 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 TBX1O43435 398 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 TBC1D4O60343 1298 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 B4GALT4O60513 344 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 DAB1O75553 588 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 SOAT2O75908 522 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 NDST3O95803 873 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 MT-CO1P00395 513 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 FYNP06241 537 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 STMN1P16949 149 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 CHRM3P20309 590 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 AGXTP21549 392 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 RGS7P49802 495 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 ATXN1P54253 815 aaKnown RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 POU5F1BQ06416 359 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 TRIM71Q2Q1W2 868 aaKnown RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 COQ5Q5HYK3 327 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 CEP78Q5JTW2 689 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 FAAH2Q6GMR7 532 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 CCDC81Q6ZN84 652 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 PID1Q7Z2X4 250 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 IFNEQ86WN2 208 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 RIMKLAQ8IXN7 391 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 FIG4Q92562 907 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 GPRASP2Q96D09 838 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 CCDC126Q96EE4 140 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 KCTD14Q9BQ13 255 aaPredicted RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 FEM1AQ9BSK4 669 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 TRIM8Q9BZR9 551 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 SNTG2Q9NY99 539 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 NPAP1Q9NZP6 1156 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 TSPAN16Q9UKR8 245 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 MSCO60682 206 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 AHSGP02765 367 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 POLD2P49005 469 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 KPNA2P52292 529 aaKnown RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 TPD52P55327 224 aaPredicted RBP8□□□□□ -1.13
HMGXB4-202ENST00000418170 SP4Q02446 784 aa8□□□□□ -1.13
HMGXB4-202ENST00000418170 C19orf57Q0VDD7 668 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms