RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 HACD3Q9P035 362 aa12.44□□□□□ -0.42
SKA1-203ENST00000417656 PNMA8BQ9ULN7 279 aaPredicted RBP12.44□□□□□ -0.42
SKA1-203ENST00000417656 SAR1BQ9Y6B6 198 aa12.44□□□□□ -0.42
SKA1-203ENST00000417656 KNL1Q8NG31 2342 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 E7EVH7 732 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 CACNB4O00305 520 aaPredicted RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 YKT6O15498 198 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 BUD23O43709 281 aaKnown RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 DFNA5O60443 496 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 MYCLP1P12525 358 aaPredicted RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 NME1P15531 152 aaKnown RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 COILP38432 576 aaPredicted RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 GPR1P46091 355 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 RXRGP48443 463 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 LMAN1P49257 510 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 DCDC1P59894 354 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 ETF1P62495 437 aaKnown RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 BASP1P80723 227 aaKnown RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 CDK3Q00526 305 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 DPTQ07507 201 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 PTK2BQ14289 1009 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 TRIP13Q15645 432 aaPredicted RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 ALG11Q2TAA5 492 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 HENMT1Q5T8I9 393 aaKnown RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 KCTD16Q68DU8 428 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 CCDC137Q6PK04 289 aaKnown RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 TRIM74Q86UV6 250 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 CREG2Q8IUH2 290 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 NAXDQ8IW45 347 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 PHACTR4Q8IZ21 702 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 NRSN1Q8IZ57 195 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 RBFAQ8N0V3 343 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 GPR26Q8NDV2 337 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 TRIM44Q96DX7 344 aaPredicted RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 PDXPQ96GD0 296 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 C16orf45Q96MC5 204 aaPredicted RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 WDR92Q96MX6 357 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 RTKNQ9BST9 563 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 LGR4Q9BXB1 951 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 TCEAL2Q9H3H9 227 aaPredicted RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 TRABDQ9H4I3 376 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 FGF22Q9HCT0 170 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 BPIFA1Q9NP55 256 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 PHPT1Q9NRX4 125 aaPredicted RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 DLL3Q9NYJ7 618 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 NFKBIL1Q9UBC1 381 aaPredicted RBP12.43□□□□□ -0.42
SKA1-203ENST00000417656 KLQ9UEF7 1012 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 KLF15Q9UIH9 416 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 ARL5AQ9Y689 179 aa12.43□□□□□ -0.42
SKA1-203ENST00000417656 RGSL1A5PLK6 1076 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 TMEM202A6NGA9 273 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 ERI2A8K979 691 aaKnown RBP12.42□□□□□ -0.42
SKA1-203ENST00000417656 FADS2P1A8MWK0 482 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 PDE2AO00408 941 aaPredicted RBP12.42□□□□□ -0.42
SKA1-203ENST00000417656 SCAMP1O15126 338 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 INPP4BO15327 924 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 PSMD3O43242 534 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 PCDHGA12O60330 932 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 KRT14P02533 472 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 APRTP07741 180 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 BPIP17213 487 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 JUNDP17535 347 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 SDHBP21912 280 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 HTR1BP28222 390 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 TEAD1P28347 426 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 CASQ1P31415 396 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 HMGCLP35914 325 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 TRIM23P36406 574 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 FNTAP49354 379 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 BNIP3Q12983 259 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 SLC14A1Q13336 389 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 PTPRCAPQ14761 206 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 DOK6Q6PKX4 331 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 ENPP7Q6UWV6 458 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 ADAMTSL4Q6UY14 1074 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 KANSL1Q7Z3B3 1105 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 RAVER1Q8IY67 606 aaKnown RBP12.42□□□□□ -0.42
SKA1-203ENST00000417656 DEFB124Q8NES8 71 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 OR52K1Q8NGK4 314 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 ATL2Q8NHH9 583 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 SAP25Q8TEE9 199 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 OR1E3Q8WZA6 343 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 CAMK1GQ96NX5 476 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 TEX101Q9BY14 249 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 DDX47Q9H0S4 455 aaKnown RBP12.42□□□□□ -0.42
SKA1-203ENST00000417656 FAM83DQ9H4H8 585 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 ARNT2Q9HBZ2 717 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 UCKL1Q9NWZ5 548 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.42□□□□□ -0.42
SKA1-203ENST00000417656 APOBEC3BQ9UH17 382 aaKnown RBP12.42□□□□□ -0.42
SKA1-203ENST00000417656 BTBD3Q9Y2F9 522 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 PCDHGB2Q9Y5G2 931 aa12.42□□□□□ -0.42
SKA1-203ENST00000417656 TDRD6O60522 2096 aaKnown RBP12.42□□□□□ -0.42
SKA1-203ENST00000417656 DCDC2BA2VCK2 349 aa12.41□□□□□ -0.42
SKA1-203ENST00000417656 H3BM21 787 aa12.41□□□□□ -0.42
SKA1-203ENST00000417656 TM4SF5O14894 197 aa12.41□□□□□ -0.42
SKA1-203ENST00000417656 FLRT2O43155 660 aa12.41□□□□□ -0.42
SKA1-203ENST00000417656 SH3BP5O60239 455 aa12.41□□□□□ -0.42
SKA1-203ENST00000417656 PIAS2O75928 621 aa12.41□□□□□ -0.42
SKA1-203ENST00000417656 SUN1O94901 812 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms