RNA–Protein interactions for RNA: ENST00000417292.5

SSB-204, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-204ENST00000417292 ADCY8P40145 1251 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 JAM2P57087 298 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 YBEYP58557 167 aaPredicted RBP13.71□□□□□ -0.21
SSB-204ENST00000417292 ACOX1Q15067 660 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 PARP15Q460N3 678 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 EFCAB3Q8N7B9 438 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 TSEN2Q8NCE0 465 aaKnown RBP13.71□□□□□ -0.21
SSB-204ENST00000417292 JOSD2Q8TAC2 188 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 CPT1CQ8TCG5 803 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 EPS8L1Q8TE68 723 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 CENPIQ92674 756 aaPredicted RBP13.71□□□□□ -0.21
SSB-204ENST00000417292 COQ10AQ96MF6 247 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 NSMCE3Q96MG7 304 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 ZPBPQ9BS86 351 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 ZMYND15Q9H091 742 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 TRIT1Q9H3H1 467 aaKnown RBP13.71□□□□□ -0.21
SSB-204ENST00000417292 CUEDC1Q9NWM3 386 aaPredicted RBP13.71□□□□□ -0.21
SSB-204ENST00000417292 RPS6KL1Q9Y6S9 549 aa13.71□□□□□ -0.21
SSB-204ENST00000417292 SHANK1Q9Y566 2161 aa13.71□□□□□ -0.22
SSB-204ENST00000417292 ESPL1Q14674 2120 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 HIVEP3Q5T1R4 2406 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 TRBV23OR9-2A0A075B6M9 112 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 C2CD4BA6NLJ0 364 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 CHRNB2P17787 502 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 SERPINA4P29622 427 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 SDC4P31431 198 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 MAN1A1P33908 653 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 DCTP40126 519 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 ACTR1BP42025 376 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 FASLGP48023 281 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 ACTR1AP61163 376 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 NOMO3P69849 1222 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 CDK3Q00526 305 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 ERV3-1Q14264 604 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 NAA35Q5VZE5 725 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 STRADAQ7RTN6 431 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 SRLQ86TD4 932 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 UMODL1-AS1Q8N2C9 162 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 NTAN1Q96AB6 310 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 NUS1Q96E22 293 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 AHCYL2Q96HN2 611 aaKnown RBP13.7□□□□□ -0.22
SSB-204ENST00000417292 ERGIC2Q96RQ1 377 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 ATP13A3Q9H7F0 1226 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
SSB-204ENST00000417292 PHPT1Q9NRX4 125 aaPredicted RBP13.7□□□□□ -0.22
SSB-204ENST00000417292 B4GALT6Q9UBX8 382 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 NOCTQ9UK39 431 aaKnown RBP13.7□□□□□ -0.22
SSB-204ENST00000417292 SRPK3Q9UPE1 567 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 SLC17A4Q9Y2C5 497 aa13.7□□□□□ -0.22
SSB-204ENST00000417292 WASH4PA8MWX3 477 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 TRAFD1O14545 582 aaPredicted RBP13.69□□□□□ -0.22
SSB-204ENST00000417292 RFPL1O75677 317 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 DNAJB5O75953 348 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 LSM8O95777 96 aaKnown RBP13.69□□□□□ -0.22
SSB-204ENST00000417292 CLDN1O95832 211 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 EML2O95834 649 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 ZNF28P17035 718 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 POU3F2P20265 443 aaPredicted RBP13.69□□□□□ -0.22
SSB-204ENST00000417292 PTMSP20962 102 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 DLSTP36957 453 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 PTPN9P43378 593 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 CSNK1DP48730 415 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 WDR74Q6RFH5 385 aaPredicted RBP13.69□□□□□ -0.22
SSB-204ENST00000417292 TICAM1Q8IUC6 712 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 ESX1Q8N693 406 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 OR10G6Q8NH81 332 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 SLC37A2Q8TED4 501 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 FAM172AQ8WUF8 416 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 SLC38A3Q99624 504 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 LRRC19Q9H756 370 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 CROTQ9UKG9 612 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 MAP4K5Q9Y4K4 846 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 PCDHB3Q9Y5E6 796 aa13.69□□□□□ -0.22
SSB-204ENST00000417292 TNRC6AQ8NDV7 1962 aaKnown RBP13.69□□□□□ -0.22
SSB-204ENST00000417292 ZNF106Q9H2Y7 1883 aaKnown RBP13.68□□□□□ -0.22
SSB-204ENST00000417292 POLR1CO15160 346 aaPredicted RBP13.68□□□□□ -0.22
SSB-204ENST00000417292 PRAMEF11O60813 436 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 SERPINC1P01008 464 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 IVLP07476 585 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 ETV3P41162 512 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 PPM1FP49593 454 aaPredicted RBP13.68□□□□□ -0.22
SSB-204ENST00000417292 PMS2P54278 862 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 POLR2LP62875 67 aaKnown RBP13.68□□□□□ -0.22
SSB-204ENST00000417292 FMO1Q01740 532 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 BCL2L1Q07817 233 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 MAP7Q14244 749 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 CNGA3Q16281 694 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 SKOR2Q2VWA4 1001 aaPredicted RBP13.68□□□□□ -0.22
SSB-204ENST00000417292 NADK2Q4G0N4 442 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.68□□□□□ -0.22
SSB-204ENST00000417292 MAMDC2Q7Z304 686 aaPredicted RBP13.68□□□□□ -0.22
SSB-204ENST00000417292 SLFN11Q7Z7L1 901 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 CBARPQ8N350 705 aaPredicted RBP13.68□□□□□ -0.22
SSB-204ENST00000417292 SFRP1Q8N474 314 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 MSANTD4Q8NCY6 345 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 NCSTNQ92542 709 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 SCARF2Q96GP6 870 aaPredicted RBP13.68□□□□□ -0.22
SSB-204ENST00000417292 PCDHB18PQ96TA0 734 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 CASS4Q9NQ75 786 aa13.68□□□□□ -0.22
SSB-204ENST00000417292 SIDT1Q9NXL6 827 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms