RNA–Protein interactions for RNA: ENST00000416603.1

THUMPD3-202, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-202ENST00000416603 PPP1R2P41236 205 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 GPD2P43304 727 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 ACADVLP49748 655 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 ZNF143P52747 638 aaPredicted RBP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 METAP1P53582 386 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 STX17P56962 302 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 YBX1P67809 324 aaKnown RBP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 PITX1P78337 314 aaPredicted RBP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 GCNT1Q02742 428 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 SULT2A1Q06520 285 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 TARDBPQ13148 414 aaKnown RBP eCLIP6.77□□□□□ -1.331e-10■■■■■ 37.7
THUMPD3-202ENST00000416603 SLC12A1Q13621 1099 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 SHBQ15464 509 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 TMC6Q7Z403 805 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 CCAR2Q8N163 923 aaKnown RBP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 CBARPQ8N350 705 aaPredicted RBP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 ARHGEF39Q8N4T4 335 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 NKAPQ8N5F7 415 aaKnown RBP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 LMO3Q8TAP4 145 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 NELFBQ8WX92 580 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 PTPRN2Q92932 1015 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 DHTKD1Q96HY7 919 aaPredicted RBP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 RCC1LQ96I51 464 aaKnown RBP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 BTN2A3PQ96KV6 586 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 RPRD1AQ96P16 312 aaPredicted RBP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 SPAG5Q96R06 1193 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 INTS2Q9H0H0 1204 aaKnown RBP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 POPDC2Q9HBU9 364 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 DDIT4Q9NX09 232 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 CYTH4Q9UIA0 394 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 MAN1B1Q9UKM7 699 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 CNOT6Q9ULM6 557 aaKnown RBP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 TNPO3Q9Y5L0 923 aaKnown RBP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 FASNP49327 2511 aaKnown RBP6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 DOCK4Q8N1I0 1966 aa6.77□□□□□ -1.33
THUMPD3-202ENST00000416603 A0A1B0GVM2 712 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 BICDL2A1A5D9 508 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 CCDC66A2RUB6 948 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 KCNU1A8MYU2 1149 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 FFAR2O15552 330 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 LATO43561 262 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 PLRG1O43660 514 aaKnown RBP6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 TLX3O43711 291 aaPredicted RBP6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 MAGEC1O60732 1142 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 GRAP2O75791 330 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 PRB1P04280 392 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 C1SP09871 688 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 CDK4P11802 303 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 TACR1P25103 407 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 CCR1P32246 355 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 SEPHS1P49903 392 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 RENBPP51606 427 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 YWHAZP63104 245 aaKnown RBP6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 CDK17Q00537 523 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 CNTN1Q12860 1018 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 NME3Q13232 169 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 PDCLQ13371 301 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 DLG2Q15700 870 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 ARHGAP44Q17R89 818 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 SETMARQ53H47 684 aaPredicted RBP6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 FAM46CQ5VWP2 391 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 OR6B2Q6IFH4 312 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 LVRNQ6Q4G3 990 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 RPTNQ6XPR3 784 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 KDM7AQ6ZMT4 941 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 RBM43Q6ZSC3 357 aaKnown RBP6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 LCNL1Q6ZST4 164 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 BEND5Q7L4P6 421 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 DEFB106AQ8N104 65 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 ZNF606Q8WXB4 792 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 KLK6Q92876 244 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 PPP1R14AQ96A00 147 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 MED15Q96RN5 788 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 THAP9Q9H5L6 903 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 CNTD2Q9H8S5 307 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 ERVMER34-1Q9H9K5 563 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 UBE2TQ9NPD8 197 aaPredicted RBP6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 ACP6Q9NPH0 428 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 ANLNQ9NQW6 1124 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 DYRK4Q9NR20 520 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 VPS28Q9UK41 221 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 VANGL2Q9ULK5 521 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 CLCA2Q9UQC9 943 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 DMTF1Q9Y222 760 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 CA5BQ9Y2D0 317 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 LAMA5O15230 3695 aa6.76□□□□□ -1.33
THUMPD3-202ENST00000416603 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.75□□□□□ -1.33
THUMPD3-202ENST00000416603 PRAMEF26H0Y7S4 382 aa6.75□□□□□ -1.33
THUMPD3-202ENST00000416603 KPNA3O00505 521 aaPredicted RBP6.75□□□□□ -1.33
THUMPD3-202ENST00000416603 SLC31A1O15431 190 aa6.75□□□□□ -1.33
THUMPD3-202ENST00000416603 SLC7A4O43246 635 aa6.75□□□□□ -1.33
THUMPD3-202ENST00000416603 OPA1O60313 960 aa6.75□□□□□ -1.33
THUMPD3-202ENST00000416603 PRKD3O94806 890 aa6.75□□□□□ -1.33
THUMPD3-202ENST00000416603 KCNH1O95259 989 aa6.75□□□□□ -1.33
THUMPD3-202ENST00000416603 GNA14O95837 355 aa6.75□□□□□ -1.33
THUMPD3-202ENST00000416603 IGLV3-25P01717 112 aa6.75□□□□□ -1.33
THUMPD3-202ENST00000416603 RHOCP08134 193 aa6.75□□□□□ -1.33
THUMPD3-202ENST00000416603 THEGLP0DJG4 465 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms