RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 ATXN7L1Q9ULK2 861 aaPredicted RBP15.06■□□□□ 0
UBXN4-203ENST00000416538 SLC17A4Q9Y2C5 497 aa15.06■□□□□ 0
UBXN4-203ENST00000416538 RRP8O43159 456 aaKnown RBP15.05■□□□□ -0
UBXN4-203ENST00000416538 HGFP14210 728 aa15.05■□□□□ -0
UBXN4-203ENST00000416538 NOP2P46087 812 aaKnown RBP15.05■□□□□ -0
UBXN4-203ENST00000416538 GNPDA1P46926 289 aa15.05■□□□□ -0
UBXN4-203ENST00000416538 ERVPABLB-1P60509 514 aa15.05■□□□□ -0
UBXN4-203ENST00000416538 IFI35P80217 286 aaPredicted RBP15.05■□□□□ -0
UBXN4-203ENST00000416538 QPCTQ16769 361 aa15.05■□□□□ -0
UBXN4-203ENST00000416538 SKOR2Q2VWA4 1001 aaPredicted RBP15.05■□□□□ -0
UBXN4-203ENST00000416538 PCSK4Q6UW60 755 aa15.05■□□□□ -0
UBXN4-203ENST00000416538 LRRC69Q6ZNQ3 347 aa15.05■□□□□ -0
UBXN4-203ENST00000416538 Q8N9G6 341 aaPredicted RBP15.05■□□□□ -0
UBXN4-203ENST00000416538 ZNF248Q8NDW4 579 aa15.05■□□□□ -0
UBXN4-203ENST00000416538 SCG3Q8WXD2 468 aaKnown RBP15.05■□□□□ -0
UBXN4-203ENST00000416538 AP2M1Q96CW1 435 aa15.05■□□□□ -0
UBXN4-203ENST00000416538 LIN37Q96GY3 246 aaPredicted RBP15.05■□□□□ -0
UBXN4-203ENST00000416538 SLC46A1Q96NT5 459 aa15.05■□□□□ -0
UBXN4-203ENST00000416538 LRRN3Q9H3W5 708 aa15.05■□□□□ -0
UBXN4-203ENST00000416538 TFR2Q9UP52 801 aa15.05■□□□□ -0
UBXN4-203ENST00000416538 TMEM98Q9Y2Y6 226 aa15.05■□□□□ -0
UBXN4-203ENST00000416538 PCDHGA8Q9Y5G5 932 aa15.05■□□□□ -0
UBXN4-203ENST00000416538 CCDC187A0A096LP49 1063 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 FADS2P1A8MWK0 482 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 ZNF487B1APH4 448 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 CLDN7O95471 211 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 JCHAINP01591 159 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 KRT1P04264 644 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 GLB1P16278 677 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 CD86P42081 329 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 GPR1P46091 355 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 CTBSQ01459 385 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 FOXR1Q6PIV2 292 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 SLC30A9Q6PML9 568 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 ADAMTSL4Q6UY14 1074 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 CLEC14AQ86T13 490 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 NAGSQ8N159 534 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 CCNYQ8ND76 341 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 WDR48Q8TAF3 677 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 EID2BQ96D98 161 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 SCARF2Q96GP6 870 aaPredicted RBP15.04■□□□□ -0
UBXN4-203ENST00000416538 GFM1Q96RP9 751 aaKnown RBP15.04■□□□□ -0
UBXN4-203ENST00000416538 TRIB3Q96RU7 358 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 LYSMD1Q96S90 227 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 RIOK2Q9BVS4 552 aaKnown RBP15.04■□□□□ -0
UBXN4-203ENST00000416538 DPEP2Q9H4A9 486 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 PCDH9Q9HC56 1237 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 EPB41L5Q9HCM4 733 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 TAAR2Q9P1P5 351 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 AMACRQ9UHK6 382 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 APPL1Q9UKG1 709 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 HEY1Q9Y5J3 304 aa15.04■□□□□ -0
UBXN4-203ENST00000416538 OAS3Q9Y6K5 1087 aaKnown RBP15.04■□□□□ -0
UBXN4-203ENST00000416538 AGRPO00253 132 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 INPP4BO15327 924 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 PRB1P04280 392 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 FGF1P05230 155 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 IVLP07476 585 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 ZNF30P17039 623 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 MX2P20592 715 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 CCKBRP32239 447 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 ADCY8P40145 1251 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 MARCKSL1P49006 195 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 B4GALNT1Q00973 533 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 GALNT3Q14435 633 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 TSR1Q2NL82 804 aaKnown RBP15.03■□□□□ -0
UBXN4-203ENST00000416538 ZFYVE27Q5T4F4 411 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 MFSD7Q6UXD7 560 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 ZNF765Q7L2R6 523 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 ZNF438Q7Z4V0 828 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 SLITRK4Q8IW52 837 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 MAP7D3Q8IWC1 876 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 LSMEM2Q8N112 164 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 TC2NQ8N9U0 490 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 WDR36Q8NI36 951 aaKnown RBP15.03■□□□□ -0
UBXN4-203ENST00000416538 KCNE4Q8WWG9 221 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 RNF25Q96BH1 459 aaPredicted RBP15.03■□□□□ -0
UBXN4-203ENST00000416538 GRAMD1AQ96CP6 724 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 COX14Q96I36 57 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 CCDC42Q96M95 316 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 CPNE5Q9HCH3 593 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 THSD1Q9NS62 852 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 ZNHIT6Q9NWK9 470 aaKnown RBP15.03■□□□□ -0
UBXN4-203ENST00000416538 TRNAU1APQ9NX07 287 aaKnown RBP15.03■□□□□ -0
UBXN4-203ENST00000416538 CNOT6Q9ULM6 557 aaKnown RBP15.03■□□□□ -0
UBXN4-203ENST00000416538 ATMQ13315 3056 aa15.03■□□□□ -0
UBXN4-203ENST00000416538 PDE2AO00408 941 aaPredicted RBP15.02■□□□□ -0
UBXN4-203ENST00000416538 APOL1O14791 398 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 B4GAT1O43505 415 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 NUDT21O43809 227 aaKnown RBP15.02■□□□□ -0
UBXN4-203ENST00000416538 C1QL1O75973 258 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 TNFSF15O95150 251 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 ECEL1O95672 775 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 EML2O95834 649 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 PECAM1P16284 738 aaPredicted RBP15.02■□□□□ -0
UBXN4-203ENST00000416538 COMTP21964 271 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 UGT1A5P35504 534 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 ETV5P41161 510 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 EPHB1P54762 984 aa15.02■□□□□ -0
UBXN4-203ENST00000416538 INHBCP55103 352 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms