RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 FUCA2Q9BTY2 467 aa19.26■□□□□ 0.67
UBXN4-202ENST00000415164 LMBRD1Q9NUN5 540 aa19.26■□□□□ 0.67
UBXN4-202ENST00000415164 ST14Q9Y5Y6 855 aa19.26■□□□□ 0.67
UBXN4-202ENST00000415164 BSNQ9UPA5 3926 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 IGHV1OR21-1A0A087WYE8 117 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 ASMTLO95671 621 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 ATP1A3P13637 1013 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 CSF2RBP32927 897 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 UGT1A3P35503 534 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 MMP13P45452 471 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 TRA2AQ13595 282 aaKnown RBP eCLIP19.25■□□□□ 0.67
UBXN4-202ENST00000415164 NR1D2Q14995 579 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 CLPPQ16740 277 aaPredicted RBP19.25■□□□□ 0.67
UBXN4-202ENST00000415164 RFLNAQ6ZTI6 216 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 PSTKQ8IV42 348 aaKnown RBP19.25■□□□□ 0.67
UBXN4-202ENST00000415164 AOPEPQ8N6M6 819 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 AP2M1Q96CW1 435 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 SLC38A3Q99624 504 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 HAUS4Q9H6D7 363 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 NT5MQ9NPB1 228 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.25■□□□□ 0.67
UBXN4-202ENST00000415164 GEMIN8Q9NWZ8 242 aaKnown RBP19.25■□□□□ 0.67
UBXN4-202ENST00000415164 OCIAD1Q9NX40 245 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 SLC17A4Q9Y2C5 497 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 SCINQ9Y6U3 715 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 HECTD1Q9ULT8 2610 aa19.25■□□□□ 0.67
UBXN4-202ENST00000415164 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.24■□□□□ 0.67
UBXN4-202ENST00000415164 INPP4BO15327 924 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 RAD1O60671 282 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 PGLSO95336 258 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 IVLP07476 585 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 THRAP10827 490 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 MAPK9P45984 424 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 HCAR3P49019 387 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 ARSDP51689 593 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 ZNF135P52742 658 aaPredicted RBP19.24■□□□□ 0.67
UBXN4-202ENST00000415164 EPHB1P54762 984 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 TLE1Q04724 770 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 MARC1Q5VT66 337 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 LRRC66Q68CR7 880 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 GALNT13Q8IUC8 556 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 NDUFAF2Q8N183 169 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 SCAMP4Q969E2 229 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 SMIM14Q96QK8 99 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 CTRCQ99895 268 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 SEMA3CQ99985 751 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 MGME1Q9BQP7 344 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 SLC12A9Q9BXP2 914 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 B3GNT4Q9C0J1 378 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 TTLL3Q9Y4R7 772 aa19.24■□□□□ 0.67
UBXN4-202ENST00000415164 PSMD11O00231 422 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 MAFKO60675 156 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 MAP3K6O95382 1288 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 PEX11BO96011 259 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 PRKAR1AP10644 381 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 TCF4P15884 667 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 CR2P20023 1033 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 IL1R2P27930 398 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 POLE2P56282 527 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 KCNAB2Q13303 367 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 DCAF12Q5T6F0 453 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 ANKS6Q68DC2 871 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 ZNF571Q7Z3V5 609 aaPredicted RBP19.23■□□□□ 0.67
UBXN4-202ENST00000415164 OR10G6Q8NH81 332 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 SCRN2Q96FV2 425 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 CSPG4P5Q96PW8 444 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 SYT11Q9BT88 431 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 ABCG8Q9H221 673 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 KLHL3Q9UH77 587 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 PRKAB1Q9Y478 270 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 PCDHGA3Q9Y5H0 932 aa19.23■□□□□ 0.67
UBXN4-202ENST00000415164 DUX1O43812 170 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 PDHA1P08559 390 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 SERPINB6P35237 376 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 SSR1P43307 286 aaKnown RBP19.22■□□□□ 0.67
UBXN4-202ENST00000415164 CCR10P46092 362 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 CDH6P55285 790 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 NFATC2Q13469 925 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 KRT81Q14533 505 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 DPYSL2Q16555 572 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 SKIDA1Q1XH10 827 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 TMEM71Q6P5X7 295 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 APTXQ7Z2E3 356 aaKnown RBP19.22■□□□□ 0.67
UBXN4-202ENST00000415164 POLNQ7Z5Q5 900 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 TECPR1Q7Z6L1 1165 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 SLC37A2Q8TED4 501 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 DDA1Q9BW61 102 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 ASPSCR1Q9BZE9 553 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 MRPL47Q9HD33 250 aaKnown RBP19.22■□□□□ 0.67
UBXN4-202ENST00000415164 ZNHIT2Q9UHR6 403 aa19.22■□□□□ 0.67
UBXN4-202ENST00000415164 ARHGEF17Q96PE2 2063 aaPredicted RBP19.21■□□□□ 0.67
UBXN4-202ENST00000415164 LRRC10BA6NIK2 292 aa19.21■□□□□ 0.67
UBXN4-202ENST00000415164 ZNF891A8MT65 544 aaPredicted RBP19.21■□□□□ 0.67
UBXN4-202ENST00000415164 SKILP12757 684 aa19.21■□□□□ 0.67
UBXN4-202ENST00000415164 TEAD1P28347 426 aa19.21■□□□□ 0.67
UBXN4-202ENST00000415164 GPLD1P80108 840 aa19.21■□□□□ 0.67
UBXN4-202ENST00000415164 KLHL30Q0D2K2 578 aa19.21■□□□□ 0.67
UBXN4-202ENST00000415164 PYCR3Q53H96 274 aa19.21■□□□□ 0.67
UBXN4-202ENST00000415164 ADAMTSL4Q6UY14 1074 aa19.21■□□□□ 0.67
UBXN4-202ENST00000415164 RBM43Q6ZSC3 357 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms