RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 PRR33A8MZF0 331 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 WNT9AO14904 365 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 LAMTOR5O43504 91 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 BUD23O43709 281 aaKnown RBP13.24□□□□□ -0.29
CNN3-203ENST00000415017 RNGTTO60942 597 aaKnown RBP13.24□□□□□ -0.29
CNN3-203ENST00000415017 RECQL5O94762 991 aaPredicted RBP13.24□□□□□ -0.29
CNN3-203ENST00000415017 SEMA4FO95754 770 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 SOD1P00441 154 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 IGHV4-34P06331 123 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 UQCRHP07919 91 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 FOXN2P32314 431 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 ETV3P41162 512 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 SEPT6Q14141 434 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 LONRF1Q17RB8 773 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 TMEM31Q5JXX7 168 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 SEL1L3Q68CR1 1132 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 CASC4Q6P4E1 433 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 TRMT10BQ6PF06 316 aaKnown RBP13.24□□□□□ -0.29
CNN3-203ENST00000415017 C3orf62Q6ZUJ4 267 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 PALM2Q8IXS6 379 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 LMNTD2Q8IXW0 634 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 UNC5BQ8IZJ1 945 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 IQCKQ8N0W5 287 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 PGBD3Q8N328 593 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 PAF1Q8N7H5 531 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 FRMD1Q8N878 549 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 CADM4Q8NFZ8 388 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 CXorf40AQ8TE69 158 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 ANKRD7Q92527 254 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 HDAC10Q969S8 669 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 ZNF669Q96BR6 464 aaPredicted RBP13.24□□□□□ -0.29
CNN3-203ENST00000415017 CENPTQ96BT3 561 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 CERS2Q96G23 380 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 TOE1Q96GM8 510 aaKnown RBP13.24□□□□□ -0.29
CNN3-203ENST00000415017 FAM126AQ9BYI3 521 aaPredicted RBP13.24□□□□□ -0.29
CNN3-203ENST00000415017 TPSD1Q9BZJ3 242 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 ABCG8Q9H221 673 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 ACSS3Q9H6R3 686 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 SMOXQ9NWM0 555 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 PKD2L2Q9NZM6 624 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 RABGEF1Q9UJ41 708 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 APPL1Q9UKG1 709 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 CYP8B1Q9UNU6 501 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 PKP3Q9Y446 797 aa13.24□□□□□ -0.29
CNN3-203ENST00000415017 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.24□□□□□ -0.29
CNN3-203ENST00000415017 A0A1W2PQU0 124 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 CCDC162PA2VCL2 907 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 ERLIN1O75477 346 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 TM7SF2O76062 418 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 NUDT17P0C025 328 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 PAMP19021 973 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 TRIM23P36406 574 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 HSD17B3P37058 310 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 SPAM1P38567 509 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 PXNP49023 591 aaPredicted RBP13.23□□□□□ -0.29
CNN3-203ENST00000415017 PPP2CBP62714 309 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 PPP2CAP67775 309 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 SLC29A2Q14542 456 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 PDPK2PQ6A1A2 396 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 FBXO38Q6PIJ6 1188 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 GALNT7Q86SF2 657 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 LONP2Q86WA8 852 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 TRAM1L1Q8N609 369 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 TP53I13Q8NBR0 393 aaPredicted RBP13.23□□□□□ -0.29
CNN3-203ENST00000415017 GANCQ8TET4 914 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 SLC17A9Q9BYT1 436 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 FAM83DQ9H4H8 585 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 SUDS3Q9H7L9 328 aaPredicted RBP13.23□□□□□ -0.29
CNN3-203ENST00000415017 EBF2Q9HAK2 575 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 BPIFA1Q9NP55 256 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 SMYD2Q9NRG4 433 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 FETUBQ9UGM5 382 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 FKBPLQ9UIM3 349 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 TMPRSS11EQ9UL52 423 aa13.23□□□□□ -0.29
CNN3-203ENST00000415017 LRP4O75096 1905 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 IGLV3-16A0A075B6K0 115 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 TBC1D3DA0A087WVF3 549 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 TBC1D3IA0A087WXS9 549 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 TBC1D3EA0A087X179 549 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 TBC1D3KA0A087X1G2 549 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 GLYATL1P3A0A0U1RQE8 302 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 TBC1D3FA6NER0 549 aaPredicted RBP13.22□□□□□ -0.29
CNN3-203ENST00000415017 METTL12A8MUP2 240 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 TBC1D3LB9A6J9 549 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 NEMP1O14524 444 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 TCEA3O75764 348 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 SRP72O76094 671 aaKnown RBP13.22□□□□□ -0.29
CNN3-203ENST00000415017 PCDH8O95206 1070 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 VAPBO95292 243 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 TBC1D3HP0C7X1 549 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 CA5AP35218 305 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 NUDT1P36639 197 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 ACOX1Q15067 660 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 TYSND1Q2T9J0 566 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 WSCD2Q2TBF2 565 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 GPR33Q49SQ1 333 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 USP39Q53GS9 565 aaKnown RBP13.22□□□□□ -0.29
CNN3-203ENST00000415017 TEDDM1Q5T9Z0 273 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 KIAA0895LQ68EN5 471 aa13.22□□□□□ -0.29
CNN3-203ENST00000415017 TBC1D3GQ6DHY5 549 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms