RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 CITED2Q99967 270 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 TUBB6Q9BUF5 446 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 MID1IP1Q9NPA3 183 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CD93Q9NPY3 652 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 MTMR4Q9NYA4 1195 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 TAS2R3Q9NYW6 316 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 SELENONQ9NZV5 590 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 ANAPC2Q9UJX6 822 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CPSF3Q9UKF6 684 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 C2CD2Q9Y426 696 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 PATJQ8NI35 1801 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 RGSL1A5PLK6 1076 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 MATN2O00339 956 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 FFAR3O14843 346 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 GPR42O15529 346 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 PRPF4O43172 522 aaKnown RBP eCLIP2.62□□□□□ -1.99
MCF2-204ENST00000414978 TULP3O75386 442 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CTAG2O75638 210 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 LETM1O95202 739 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 NDUFA10O95299 355 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 NFATC1O95644 943 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 IL1AP01583 271 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 ALDOAP04075 364 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 PRR35P0CG20 571 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 MMP9P14780 707 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 ZNF28P17035 718 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CR2P20023 1033 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 ANXA7P20073 488 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 CYP2C18P33260 490 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 DEKP35659 375 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 TAGLN2P37802 199 aaKnown RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 CAMPP49913 170 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CLCNKBP51801 687 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 METAP1P53582 386 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 WNT3P56703 355 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 PMP22Q01453 160 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 GRSF1Q12849 480 aaKnown RBP eCLIP2.62□□□□□ -1.99
MCF2-204ENST00000414978 TUBB2AQ13885 445 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CAPSQ13938 189 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 SLC18A3Q16572 532 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 LRRC26Q2I0M4 334 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 TMEM119Q4V9L6 283 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 ZNF766Q5HY98 468 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 PM20D1Q6GTS8 502 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 USP17L6PQ6QN14 398 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 TREML4Q6UXN2 200 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 OTOAQ7RTW8 1153 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CLNKQ7Z7G1 428 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 NOXA1Q86UR1 476 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 TAX1BP1Q86VP1 789 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 DTX1Q86Y01 620 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 SCN4BQ8IWT1 228 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 SYT8Q8NBV8 401 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 GDAP1Q8TB36 358 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CLMNQ96JQ2 1002 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 NEK1Q96PY6 1258 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 HGH1Q9BTY7 390 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 TUBB2BQ9BVA1 445 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 ALOXE3Q9BYJ1 711 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 ASNSD1Q9NWL6 643 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 KCTD5Q9NXV2 234 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 CRNNQ9UBG3 495 aaPredicted RBP2.62□□□□□ -1.99
MCF2-204ENST00000414978 MOSPD1Q9UJG1 213 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 KLHL20Q9Y2M5 609 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 USP16Q9Y5T5 823 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 UTRNP46939 3433 aa2.62□□□□□ -1.99
MCF2-204ENST00000414978 ZNF521Q96K83 1311 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 A0A0G2JLL6 359 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 SCO2A0A1W2PP80 73 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 A0A1W2PRV1 198 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 DDTLA6NHG4 134 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 VWC2LB2RUY7 222 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 RTN2O75298 545 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 INHBBP09529 407 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 THEGLP0DJG4 465 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 PRPH2P23942 346 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 PSMA4P25789 261 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 LRPAP1P30533 357 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 MCM5P33992 734 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 RABIFP47224 123 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 TIRAPP58753 221 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 TEFQ10587 303 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 KLF10Q13118 480 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 PTK6Q13882 451 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 CYP1B1Q16678 543 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 TMEM154Q6P9G4 183 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 KIRREL2Q6UWL6 708 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 MAMDC4Q6UXC1 1216 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 CXXC5Q7LFL8 322 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 PRRT2Q7Z6L0 340 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 DNAAF5Q86Y56 855 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 DHX40Q8IX18 779 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 RNF168Q8IYW5 571 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 CPXM2Q8N436 756 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 PTGR2Q8N8N7 351 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 CMASQ8NFW8 434 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 KIF18AQ8NI77 898 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 SOCS4Q8WXH5 440 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms