RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 PHACTR4Q8IZ21 702 aa14.59□□□□□ -0.07
LIMS1-206ENST00000414829 FSTL5Q8N475 847 aaPredicted RBP14.59□□□□□ -0.07
LIMS1-206ENST00000414829 PRELID2Q8N945 189 aa14.59□□□□□ -0.07
LIMS1-206ENST00000414829 DTX3LQ8TDB6 740 aa14.59□□□□□ -0.07
LIMS1-206ENST00000414829 BRSK1Q8TDC3 778 aa14.59□□□□□ -0.07
LIMS1-206ENST00000414829 SAP25Q8TEE9 199 aa14.59□□□□□ -0.07
LIMS1-206ENST00000414829 COG1Q8WTW3 980 aa14.59□□□□□ -0.07
LIMS1-206ENST00000414829 ABCG8Q9H221 673 aa14.59□□□□□ -0.07
LIMS1-206ENST00000414829 SHOC2Q9UQ13 582 aa14.59□□□□□ -0.07
LIMS1-206ENST00000414829 DGKBQ9Y6T7 804 aa14.59□□□□□ -0.07
LIMS1-206ENST00000414829 ZNF292O60281 2723 aa14.59□□□□□ -0.07
LIMS1-206ENST00000414829 CEP192Q8TEP8 1941 aa14.58□□□□□ -0.07
LIMS1-206ENST00000414829 TRPM6Q9BX84 2022 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 GPR89AB7ZAQ6 455 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 TM4SF5O14894 197 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 PIAS2O75928 621 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 METTL18O95568 372 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 AGTP01019 485 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 TUBB4AP04350 444 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 PIRTP0C851 137 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 GPR89BP0CG08 455 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 HADHAP40939 763 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 CHRNA4P43681 627 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 NOVA1P51513 510 aaKnown RBP14.58□□□□□ -0.08
LIMS1-206ENST00000414829 HK3P52790 923 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 ETF1P62495 437 aaKnown RBP14.58□□□□□ -0.08
LIMS1-206ENST00000414829 ELOCQ15369 112 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 FAXCQ5TGI0 409 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 ENPP7Q6UWV6 458 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 PPP1R21Q6ZMI0 780 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 DGLUCYQ7Z3D6 616 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 PHYKPLQ8IUZ5 450 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 TRAM1L1Q8N609 369 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 SETD7Q8WTS6 366 aaKnown RBP14.58□□□□□ -0.08
LIMS1-206ENST00000414829 FUBP1Q96AE4 644 aaKnown RBP14.58□□□□□ -0.08
LIMS1-206ENST00000414829 HIC2Q96JB3 615 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 WDR24Q96S15 920 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 GORASP1Q9BQQ3 440 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 RIOK2Q9BVS4 552 aaKnown RBP14.58□□□□□ -0.08
LIMS1-206ENST00000414829 ZCCHC2Q9C0B9 1178 aaKnown RBP14.58□□□□□ -0.08
LIMS1-206ENST00000414829 VPS18Q9P253 973 aa14.58□□□□□ -0.08
LIMS1-206ENST00000414829 CFAP54Q96N23 3096 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.57□□□□□ -0.08
LIMS1-206ENST00000414829 STX7O15400 261 aaKnown RBP14.57□□□□□ -0.08
LIMS1-206ENST00000414829 SUN1O94901 812 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 ECEL1O95672 775 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 TNFP01375 233 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 APRTP07741 180 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 LPOP22079 712 aaPredicted RBP14.57□□□□□ -0.08
LIMS1-206ENST00000414829 DGKAP23743 735 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 CASQ1P31415 396 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 SPAM1P38567 509 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 SRP54P61011 504 aaKnown RBP14.57□□□□□ -0.08
LIMS1-206ENST00000414829 SARNPP82979 210 aaKnown RBP14.57□□□□□ -0.08
LIMS1-206ENST00000414829 IL9RQ01113 521 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 CDH17Q12864 832 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 ITGA9Q13797 1035 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 ARMC3Q5W041 872 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 CCDC137Q6PK04 289 aaKnown RBP14.57□□□□□ -0.08
LIMS1-206ENST00000414829 ERMP1Q7Z2K6 904 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 PDCD7Q8N8D1 485 aaKnown RBP14.57□□□□□ -0.08
LIMS1-206ENST00000414829 DNAAF3Q8N9W5 541 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 PLA2G15Q8NCC3 412 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 ZNF548Q8NEK5 533 aaPredicted RBP14.57□□□□□ -0.08
LIMS1-206ENST00000414829 RHBDD1Q8TEB9 315 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 SCG3Q8WXD2 468 aaKnown RBP14.57□□□□□ -0.08
LIMS1-206ENST00000414829 GLMNQ92990 594 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 SCAMP4Q969E2 229 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 MS4A14Q96JA4 679 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 SPATA16Q9BXB7 569 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 AP1M1Q9BXS5 423 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 RMI1Q9H9A7 625 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 NLGN3Q9NZ94 848 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 FTSJ1Q9UET6 329 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 CD84Q9UIB8 345 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 APPL1Q9UKG1 709 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 PCOLCE2Q9UKZ9 415 aa14.57□□□□□ -0.08
LIMS1-206ENST00000414829 RALGAPA1Q6GYQ0 2036 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 PRSS38A1L453 326 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 GOLGA8CPA6NN73 597 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 K7ESM1 405 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 KIF2AO00139 706 aaPredicted RBP14.56□□□□□ -0.08
LIMS1-206ENST00000414829 TPP1O14773 563 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 SCAMP1O15126 338 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 AQP9O43315 295 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 SH3BP5O60239 455 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 IVLP07476 585 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 CTSEP14091 401 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 COILP38432 576 aaPredicted RBP14.56□□□□□ -0.08
LIMS1-206ENST00000414829 BASP1P80723 227 aaKnown RBP14.56□□□□□ -0.08
LIMS1-206ENST00000414829 EIF2B5Q13144 721 aaKnown RBP14.56□□□□□ -0.08
LIMS1-206ENST00000414829 PTPRRQ15256 657 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 SHBQ15464 509 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 ALG11Q2TAA5 492 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 LVRNQ6Q4G3 990 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 SYDE1Q6ZW31 735 aaPredicted RBP14.56□□□□□ -0.08
LIMS1-206ENST00000414829 GLRX5Q86SX6 157 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 HID1Q8IV36 788 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 TTC30BQ8N4P2 665 aa14.56□□□□□ -0.08
LIMS1-206ENST00000414829 APOL2Q9BQE5 337 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms