RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 RCAN1P53805 252 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 PPIDQ08752 370 aaKnown RBP18.46■□□□□ 0.55
SHANK3-202ENST00000414786 SNX33Q8WV41 574 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 ERVK-18Q9QC07 812 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 AGO1Q9UL18 857 aaKnown RBP18.46■□□□□ 0.55
SHANK3-202ENST00000414786 ZSCAN5CA6NGD5 496 aaPredicted RBP18.46■□□□□ 0.55
SHANK3-202ENST00000414786 ANKRD63C9JTQ0 380 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 MTTPP55157 894 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 SLC25A3Q00325 362 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 STARD8Q92502 1023 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 C9orf16Q9BUW7 83 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 B3GNT4Q9C0J1 378 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 DUS2Q9NX74 493 aaKnown RBP18.46■□□□□ 0.55
SHANK3-202ENST00000414786 S100A1P23297 94 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 PPP3CAQ08209 521 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 ODF4Q2M2E3 257 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 KLHL35Q6PF15 583 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 GALNT13Q8IUC8 556 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 B3GALT6Q96L58 329 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 ZNF607Q96SK3 696 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 CLDND1Q9NY35 253 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 ENOPH1Q9UHY7 261 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 RBMX2Q9Y388 322 aaKnown RBP18.46■□□□□ 0.55
SHANK3-202ENST00000414786 NR2E1Q9Y466 385 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 ADAMTS12P58397 1594 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 SMCO3A2RU48 225 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 NTSR2O95665 410 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 CPNE6O95741 557 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 CHSY3Q70JA7 882 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 LDB1Q86U70 411 aaPredicted RBP18.46■□□□□ 0.55
SHANK3-202ENST00000414786 LRRC17Q8N6Y2 441 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 STAG3L4Q8TBR4 150 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 TBATAQ96M53 351 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 TCF25Q9BQ70 676 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 OR51V1Q9H2C8 321 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 ETNK2Q9NVF9 386 aa18.46■□□□□ 0.55
SHANK3-202ENST00000414786 GPR75-ASB3A0A0A6YYF3 556 aa18.46■□□□□ 0.54
SHANK3-202ENST00000414786 TNFAIP8O95379 198 aa18.46■□□□□ 0.54
SHANK3-202ENST00000414786 TRUB2O95900 331 aaKnown RBP18.46■□□□□ 0.54
SHANK3-202ENST00000414786 TNFSF9P41273 254 aa18.46■□□□□ 0.54
SHANK3-202ENST00000414786 GRIA4P48058 902 aa18.46■□□□□ 0.54
SHANK3-202ENST00000414786 ECH1Q13011 328 aa18.46■□□□□ 0.54
SHANK3-202ENST00000414786 HECTD2Q5U5R9 776 aa18.46■□□□□ 0.54
SHANK3-202ENST00000414786 YIPF4Q9BSR8 244 aa18.46■□□□□ 0.54
SHANK3-202ENST00000414786 C22orf31O95567 290 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 PECAM1P16284 738 aaPredicted RBP18.45■□□□□ 0.54
SHANK3-202ENST00000414786 CDH5P33151 784 aaPredicted RBP18.45■□□□□ 0.54
SHANK3-202ENST00000414786 ANTXR2P58335 489 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 BNIP1Q12981 228 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 ATAT1Q5SQI0 421 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 SPATC1Q76KD6 591 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 OR2AJ1Q8NGZ0 328 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 ANKRD6Q9Y2G4 727 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 TBC1D30Q9Y2I9 924 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 A0A1W2PQH9 124 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 TBX1O43435 398 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 MAFKO60675 156 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 LZTR1Q8N653 840 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 OR7A2PQ8NGA2 310 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 PDCD2LQ9BRP1 358 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 SSR3Q9UNL2 185 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 A0A1W2PQ72 361 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 ACLYP53396 1101 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 C2orf80Q0P641 193 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 VITQ6UXI7 678 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 RAB11FIP2Q7L804 512 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 RALGPS2Q86X27 583 aaPredicted RBP18.45■□□□□ 0.54
SHANK3-202ENST00000414786 TSSK3Q96PN8 268 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 C3orf14Q9HBI5 128 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 GOLGA2P5Q9HBQ8 144 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 CLEC3AO75596 197 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 SEC24AO95486 1093 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 GRK5P34947 590 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 MAPK14Q16539 360 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 C17orf64Q86WR6 236 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 ZNF227Q86WZ6 799 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 POF1BQ8WVV4 589 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 C11orf24Q96F05 449 aaPredicted RBP18.45■□□□□ 0.54
SHANK3-202ENST00000414786 RPL10LQ96L21 214 aaKnown RBP18.45■□□□□ 0.54
SHANK3-202ENST00000414786 NAGLUP54802 743 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 AFTPHQ6ULP2 937 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 GFM1Q96RP9 751 aaKnown RBP18.45■□□□□ 0.54
SHANK3-202ENST00000414786 TBCBQ99426 244 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 TRHDEQ9UKU6 1024 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 PMF1-BGLAPU3KQ54 211 aa18.45■□□□□ 0.54
SHANK3-202ENST00000414786 OR1I1O60431 355 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 TLR5O60602 858 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 GOT1P17174 413 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 SHC3Q92529 594 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 HDAC10Q969S8 669 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 ZDHHC15Q96MV8 337 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 C11orf16Q9NQ32 467 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 GON4LQ3T8J9 2241 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 TCF4P15884 667 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 IL12AP29459 219 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 CDH13P55290 713 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 RIPK1Q13546 671 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 NYAP1Q6ZVC0 841 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 NAT9Q9BTE0 207 aa18.44■□□□□ 0.54
SHANK3-202ENST00000414786 SEMA3GQ9NS98 782 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms