RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 LPPQ93052 612 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 COA7Q96BR5 231 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 EID2BQ96D98 161 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 IQCDQ96DY2 449 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 MAGEB10Q96LZ2 347 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 GAL3ST4Q96RP7 486 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 RBM15Q96T37 977 aaKnown RBP eCLIP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 JPH2Q9BR39 696 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ACBD6Q9BR61 282 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TUBB2BQ9BVA1 445 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CALN1Q9BXU9 219 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TRIM15Q9C019 465 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 SCAND2PQ9GZW5 306 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 C12orf65Q9H3J6 166 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 RMND5AQ9H871 391 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TRIM45Q9H8W5 580 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 PANK3Q9H999 370 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 RBM12Q9NTZ6 932 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 HYPKQ9NX55 129 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ELOVL2Q9NXB9 296 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 BARHL2Q9NY43 387 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 MRPL15Q9P015 296 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 NDUFAF4Q9P032 175 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 ANKMY1Q9P2S6 941 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 PI4KBQ9UBF8 816 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 SPASTQ9UBP0 616 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 CGGBP1Q9UFW8 167 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 NARFQ9UHQ1 456 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 LEF1Q9UJU2 399 aaPredicted RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 MTMR6Q9Y217 621 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 BTBD3Q9Y2F9 522 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 TBC1D30Q9Y2I9 924 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 MAB21L2Q9Y586 359 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 SRPRBQ9Y5M8 271 aaKnown RBP3.65□□□□□ -1.83
SF3B1-203ENST00000414174 U3KQV3 271 aa3.65□□□□□ -1.83
SF3B1-203ENST00000414174 NPATQ14207 1427 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 EEA1Q15075 1411 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 FAM230AA0A1W2PPH8 454 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 A0A1W2PQ09 198 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 A0A1W2PQ67 120 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 FUOMA2VDF0 154 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 URADA6NGE7 173 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 OR6C76A6NM76 312 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 UBE2Q2LH0YL09 131 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PGRMC1O00264 195 aaKnown RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 TSPAN4O14817 238 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SLC30A4O14863 429 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 AURKAO14965 403 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SRGAP3O43295 1099 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 TLX2O43763 284 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 DTNBO60941 627 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ECI2O75521 394 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SORBS2O94875 1100 aaKnown RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 CCNB2O95067 398 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 KCNK5O95279 499 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PGLSO95336 258 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 AHSA1O95433 338 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ONECUT2O95948 504 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ASS1P00966 412 aaKnown RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 AGTP01019 485 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PRLP01236 227 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 IGHEP01854 428 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 KRT6AP02538 564 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 APOA1P02647 267 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PLA2G1BP04054 148 aaKnown RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ITGA4P13612 1032 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PKMP14618 531 aaKnown RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 IL1R1P14778 569 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 RAB4AP20338 218 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SYT1P21579 422 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 HNRNPA2B1P22626 353 aaKnown RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 CALB2P22676 271 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 GIFP27352 417 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 TYK2P29597 1187 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PDHA2P29803 388 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 AVPR2P30518 371 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 GCH1P30793 250 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 HOXA9P31269 272 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SPAM1P38567 509 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SLC1A4P43007 532 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 LIMS1P48059 325 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 FNTBP49356 437 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 KHKP50053 298 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 NPY4RP50391 375 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SMSP52788 366 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 CRYBB1P53674 252 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ATP5IP56385 69 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 KIAA1024LP59773 190 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SRP54P61011 504 aaKnown RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 RAB4BP61018 213 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 STX1BP61266 288 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 XIAPP98170 497 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF200P98182 395 aaPredicted RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 TBL3Q12788 808 aaKnown RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SRSF5Q13243 272 aaKnown RBP3.64□□□□□ -1.83
SF3B1-203ENST00000414174 SCGB2A2Q13296 93 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 ART3Q13508 389 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 DECR1Q16698 335 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 KRT24Q2M2I5 525 aa3.64□□□□□ -1.83
SF3B1-203ENST00000414174 PCGF3Q3KNV8 242 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms