RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 UGT1A5P35504 534 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 GSK3BP49841 420 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 CDKN2DP55273 166 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 TNK2Q07912 1038 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 EIF4EBP2Q13542 120 aaPredicted RBP17.6■□□□□ 0.41
SDCBP-202ENST00000413219 TUBA3CQ13748 450 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 CAPRIN1Q14444 709 aaKnown RBP17.6■□□□□ 0.41
SDCBP-202ENST00000413219 ZNF773Q6PK81 442 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 CHPT1Q8WUD6 406 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 PPP1R10Q96QC0 940 aaKnown RBP17.6■□□□□ 0.41
SDCBP-202ENST00000413219 TDRD1Q9BXT4 1180 aaKnown RBP17.6■□□□□ 0.41
SDCBP-202ENST00000413219 ATXN3LQ9H3M9 355 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 SPON1Q9HCB6 807 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 OSER1Q9NX31 292 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 CDH9Q9ULB4 789 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 COQ6Q9Y2Z9 468 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 CROCCQ5TZA2 2017 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.6■□□□□ 0.41
SDCBP-202ENST00000413219 TMX2-CTNND1H3BSU7 103 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 INPP4BO15327 924 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 ZBTB11O95625 1053 aaPredicted RBP17.6■□□□□ 0.41
SDCBP-202ENST00000413219 S1PR4O95977 384 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 EEFSECP57772 596 aaKnown RBP17.6■□□□□ 0.41
SDCBP-202ENST00000413219 RELAQ04206 551 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 NFATC3Q12968 1075 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 GRB7Q14451 532 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 RPS6KA2Q15349 733 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 OFCC1Q8IZS5 231 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 ARRDC4Q8NCT1 418 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 OR13J1Q8NGT2 312 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 TRUB1Q8WWH5 349 aaKnown RBP17.6■□□□□ 0.41
SDCBP-202ENST00000413219 PTERQ96BW5 349 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 SIK2Q9H0K1 926 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 ALG2Q9H553 416 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 B3GNT3Q9Y2A9 372 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 PCDHGA4Q9Y5G9 962 aa17.6■□□□□ 0.41
SDCBP-202ENST00000413219 A0A1W2PP18 115 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 MBLAC1A4D2B0 266 aaPredicted RBP17.59■□□□□ 0.41
SDCBP-202ENST00000413219 PTGESO14684 152 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 SUPT3HO75486 399 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 CLIC3O95833 236 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 OCM2P0CE71 109 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 OCMP0CE72 109 aaPredicted RBP17.59■□□□□ 0.41
SDCBP-202ENST00000413219 CD1DP15813 335 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 CCNA2P20248 432 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 CD247P20963 164 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 OGFOD2Q6N063 350 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 SPATA19Q7Z5L4 167 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 ZNF467Q7Z7K2 595 aaPredicted RBP17.59■□□□□ 0.41
SDCBP-202ENST00000413219 PTGR2Q8N8N7 351 aaPredicted RBP17.59■□□□□ 0.41
SDCBP-202ENST00000413219 SMG8Q8ND04 991 aaKnown RBP17.59■□□□□ 0.41
SDCBP-202ENST00000413219 TANKQ92844 425 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 ACDQ96AP0 544 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 KCTD14Q9BQ13 255 aaPredicted RBP17.59■□□□□ 0.41
SDCBP-202ENST00000413219 C1orf50Q9BV19 199 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 MID1IP1Q9NPA3 183 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 POLR3BQ9NW08 1133 aaPredicted RBP17.59■□□□□ 0.41
SDCBP-202ENST00000413219 FNIP2Q9P278 1114 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 IFT80Q9P2H3 777 aaPredicted RBP17.59■□□□□ 0.41
SDCBP-202ENST00000413219 SH3BP1Q9Y3L3 701 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 FUOMA2VDF0 154 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 FDXRP22570 491 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 CDH13P55290 713 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 KCNC4Q03721 635 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 DUSP28Q4G0W2 176 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 C16orf87Q6PH81 154 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 XKR5Q6UX68 686 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 RHEBL1Q8TAI7 183 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 POPDC3Q9HBV1 291 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 GMIPQ9P107 970 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 GPR45Q9Y5Y3 372 aa17.59■□□□□ 0.41
SDCBP-202ENST00000413219 OAS3Q9Y6K5 1087 aaKnown RBP17.59■□□□□ 0.41
SDCBP-202ENST00000413219 MROH6A6NGR9 719 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 IRAK2O43187 625 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 FOXD2O60548 495 aaPredicted RBP17.58■□□□□ 0.4
SDCBP-202ENST00000413219 SEC14L2O76054 403 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 TFPTP0C1Z6 253 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 MBL2P11226 248 aaPredicted RBP17.58■□□□□ 0.4
SDCBP-202ENST00000413219 HGFP14210 728 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 ETFBP38117 255 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 BCAP31P51572 246 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 BMXP51813 675 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 LIPEQ05469 1076 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 BNIP3Q12983 259 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 NFYCQ13952 458 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 CBX2Q14781 532 aaPredicted RBP17.58■□□□□ 0.4
SDCBP-202ENST00000413219 FXNQ16595 210 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 NANOGP8Q6NSW7 305 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 KDELC2Q7Z4H8 507 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 PROSER1Q86XN7 944 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 SPNS2Q8IVW8 549 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 CPNE9Q8IYJ1 553 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 CENPSQ8N2Z9 138 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 SFRP1Q8N474 314 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 OR6J1Q8NGC5 347 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 FATE1Q969F0 183 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 TUBGCP3Q96CW5 907 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 ITPKCQ96DU7 683 aa17.58■□□□□ 0.4
SDCBP-202ENST00000413219 IMP4Q96G21 291 aaKnown RBP17.58■□□□□ 0.4
SDCBP-202ENST00000413219 NAA50Q9GZZ1 169 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms