RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 C19orf43Q9BQ61 176 aa15.39■□□□□ 0.05
TRAPPC12-203ENST00000411973 TEX101Q9BY14 249 aa15.39■□□□□ 0.05
TRAPPC12-203ENST00000411973 FAM83DQ9H4H8 585 aa15.39■□□□□ 0.05
TRAPPC12-203ENST00000411973 IL17CQ9P0M4 197 aa15.39■□□□□ 0.05
TRAPPC12-203ENST00000411973 CD84Q9UIB8 345 aa15.39■□□□□ 0.05
TRAPPC12-203ENST00000411973 DMXL1Q9Y485 3027 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 SPTBN4Q9H254 2564 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 PPFIA2O75334 1257 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 TPSB2P20231 275 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 PTGIRP43119 386 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 LMAN1P49257 510 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 THOP1P52888 689 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 KIAA1024LP59773 190 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 BASP1P80723 227 aaKnown RBP15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 CDH17Q12864 832 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 NFATC4Q14934 902 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 TPSAB1Q15661 275 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 TPRG1LQ5T0D9 272 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 ZDHHC20Q5W0Z9 365 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 ADAMTSL4Q6UY14 1074 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 MACC1Q6ZN28 852 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 DTX3LQ8TDB6 740 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 NETO1Q8TDF5 533 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 FUBP1Q96AE4 644 aaKnown RBP15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 PLEKHG4BQ96PX9 1271 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 RIOK2Q9BVS4 552 aaKnown RBP15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 WDR26Q9H7D7 661 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 CASS4Q9NQ75 786 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 CDC23Q9UJX2 597 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 OR1A2Q9Y585 309 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 TDRD6O60522 2096 aaKnown RBP15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 MYLKQ15746 1914 aa15.38■□□□□ 0.05
TRAPPC12-203ENST00000411973 ZNF106Q9H2Y7 1883 aaKnown RBP15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 A0A1B0GTQ1 180 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 C2orf81A6NN90 581 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 C4orf47A7E2U8 309 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 CRTAMO95727 393 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 BPIP17213 487 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 LPOP22079 712 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 HTR1BP28222 390 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 GRIA1P42261 906 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 GPR1P46091 355 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 ARRB1P49407 418 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 PDE1BQ01064 536 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 SLC14A1Q13336 389 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 PPP1R7Q15435 360 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 STPG1Q5TH74 334 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 RAET1GQ6H3X3 334 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 SYDE1Q6ZW31 735 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 ZNF572Q7Z3I7 529 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 PARGQ86W56 976 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 GPR26Q8NDV2 337 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 SPATA4Q8NEY3 305 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 OR52K1Q8NGK4 314 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 OR2I1PQ8NGU4 316 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 AGAP2Q99490 1192 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 ZSCAN5AQ9BUG6 496 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 IL21RQ9HBE5 538 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 FNDC3AQ9Y2H6 1198 aaKnown RBP15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 PKP3Q9Y446 797 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 PCDHGB2Q9Y5G2 931 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 ARID1BQ8NFD5 2236 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 LRP4O75096 1905 aa15.37■□□□□ 0.05
TRAPPC12-203ENST00000411973 CNOT1A5YKK6 2376 aaKnown RBP15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 AP3B1O00203 1094 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 CACNB4O00305 520 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 YKT6O15498 198 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 LDB2O43679 373 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 PCDHGA12O60330 932 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 SLC4A1P02730 911 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 MYCLP1P12525 358 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 TPH1P17752 444 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 KELP23276 732 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 VPS41P49754 854 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 CCT8P50990 548 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 CDK3Q00526 305 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 DR1Q01658 176 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 EIF2B5Q13144 721 aaKnown RBP15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 PTK6Q13882 451 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 DHX34Q14147 1143 aaKnown RBP15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 KCNJ11Q14654 390 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 SHBQ15464 509 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 KCTD19Q17RG1 926 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 PRAMEF14Q5SWL7 426 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 PDPK2PQ6A1A2 396 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 PPP1R21Q6ZMI0 780 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 DBX2Q6ZNG2 339 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 HEATR4Q86WZ0 1026 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 KLHL7Q8IXQ5 586 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 TRAM1L1Q8N609 369 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 DNAAF3Q8N9W5 541 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 CPT1BQ92523 772 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 WDR92Q96MX6 357 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 LGR4Q9BXB1 951 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 BPIFA1Q9NP55 256 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 PHPT1Q9NRX4 125 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 TM7SF3Q9NS93 570 aa15.36■□□□□ 0.05
TRAPPC12-203ENST00000411973 CNOT6Q9ULM6 557 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms