RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 SEPT5Q99719 369 aaPredicted RBP3.99□□□□□ -1.77
CLHC1-205ENST00000411884 BARD1Q99728 777 aaKnown RBP3.99□□□□□ -1.77
CLHC1-205ENST00000411884 TREX2Q9BQ50 279 aaPredicted RBP3.99□□□□□ -1.77
CLHC1-205ENST00000411884 PCGF1Q9BSM1 259 aa3.99□□□□□ -1.77
CLHC1-205ENST00000411884 TM6SF1Q9BZW5 370 aa3.99□□□□□ -1.77
CLHC1-205ENST00000411884 CD93Q9NPY3 652 aa3.99□□□□□ -1.77
CLHC1-205ENST00000411884 RRP7BPQ9NSQ0 103 aa3.99□□□□□ -1.77
CLHC1-205ENST00000411884 ACSS1Q9NUB1 689 aaPredicted RBP3.99□□□□□ -1.77
CLHC1-205ENST00000411884 SELENONQ9NZV5 590 aa3.99□□□□□ -1.77
CLHC1-205ENST00000411884 C4orf47A7E2U8 309 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 BTBD18B2RXH4 712 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 PROB1E7EW31 1015 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 SCAMP1O15126 338 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 MID1O15344 667 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 HNRNPCL1O60812 293 aaKnown RBP3.98□□□□□ -1.77
CLHC1-205ENST00000411884 JRKO75564 520 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 RFPL2O75678 378 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 KDM4BO94953 1096 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 ZBTB11O95625 1053 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-205ENST00000411884 BDKRB2P30411 391 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 PPARGP37231 505 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-205ENST00000411884 HADHAP40939 763 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 LMOD3Q0VAK6 560 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 ZNF155Q12901 538 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-205ENST00000411884 DLG1Q12959 904 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 ADIPOQQ15848 244 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 CALCRLQ16602 461 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 CTF1Q16619 201 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 LRIF1Q5T3J3 769 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 GKAP1Q5VSY0 366 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-205ENST00000411884 ZNF324BQ6AW86 544 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-205ENST00000411884 ZNF280DQ6N043 979 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 KCTD18Q6PI47 426 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-205ENST00000411884 CREB3L2Q70SY1 520 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 C16orf82Q7Z2V1 217 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 ARMC9Q7Z3E5 817 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 CACNA2D4Q7Z3S7 1137 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 BEST3Q8N1M1 668 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 TTC39CQ8N584 583 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 SMRP1Q8NCR6 262 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 LILRB1Q8NHL6 650 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-205ENST00000411884 SCFD2Q8WU76 684 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 C3orf30Q96M34 536 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 HARBI1Q96MB7 349 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 CMTM3Q96MX0 182 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 MEIS3Q99687 375 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 SEBOXQ9HB31 216 aaPredicted RBP3.98□□□□□ -1.77
CLHC1-205ENST00000411884 PCDH9Q9HC56 1237 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 EIF2B3Q9NR50 452 aaKnown RBP3.98□□□□□ -1.77
CLHC1-205ENST00000411884 SMARCAL1Q9NZC9 954 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 ACSL5Q9ULC5 683 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 ARHGEF40Q8TER5 1519 aa3.98□□□□□ -1.77
CLHC1-205ENST00000411884 FSD2A1L4K1 749 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 MYO1GB0I1T2 1018 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 NDUFS3O75489 264 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 TIPRLO75663 272 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 EGFP01133 1207 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 AFPP02771 609 aaKnown RBP3.97□□□□□ -1.77
CLHC1-205ENST00000411884 LINC00271P0C7V0 271 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 HOXC9P31274 260 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 GARSP41250 739 aaKnown RBP3.97□□□□□ -1.77
CLHC1-205ENST00000411884 DRG2P55039 364 aaKnown RBP3.97□□□□□ -1.77
CLHC1-205ENST00000411884 CSNK2A1P68400 391 aaPredicted RBP3.97□□□□□ -1.77
CLHC1-205ENST00000411884 PRAMEP78395 509 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 GRIK2Q13002 908 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 SF3B4Q15427 424 aaKnown RBP eCLIP3.97□□□□□ -1.77
CLHC1-205ENST00000411884 ASTE1Q2TB18 679 aaPredicted RBP3.97□□□□□ -1.77
CLHC1-205ENST00000411884 C9orf57Q5W0N0 161 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 FAM205BPQ63HN1 556 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 FRG2Q64ET8 278 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 PMS2CLQ68D20 193 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 NADSYN1Q6IA69 706 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 JADE1Q6IE81 842 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 MZT2BQ6NZ67 158 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 DUS1LQ6P1R4 473 aaKnown RBP3.97□□□□□ -1.77
CLHC1-205ENST00000411884 PRSS57Q6UWY2 283 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 CLEC17AQ6ZS10 378 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 RNF168Q8IYW5 571 aaPredicted RBP3.97□□□□□ -1.77
CLHC1-205ENST00000411884 SRBD1Q8N5C6 995 aaKnown RBP3.97□□□□□ -1.77
CLHC1-205ENST00000411884 PCDH20Q8N6Y1 951 aaKnown RBP3.97□□□□□ -1.77
CLHC1-205ENST00000411884 CSNK2A3Q8NEV1 391 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 POMGNT1Q8WZA1 660 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 TANKQ92844 425 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 RTP4Q96DX8 246 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 MTBPQ96DY7 904 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 OR1F2PQ96R84 312 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 GHITMQ9H3K2 345 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 KAT14Q9H8E8 782 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 SETD4Q9NVD3 440 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 MCM9Q9NXL9 1143 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 MTMR6Q9Y217 621 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 LAS1LQ9Y4W2 734 aaKnown RBP3.97□□□□□ -1.77
CLHC1-205ENST00000411884 CLIC4Q9Y696 253 aa3.97□□□□□ -1.77
CLHC1-205ENST00000411884 GOLGA6L9A6NEM1 432 aa3.96□□□□□ -1.78
CLHC1-205ENST00000411884 AGAP14A8MT82 685 aa3.96□□□□□ -1.78
CLHC1-205ENST00000411884 ATP2A1O14983 1001 aa3.96□□□□□ -1.78
CLHC1-205ENST00000411884 PMS2P2O95744 297 aa3.96□□□□□ -1.78
CLHC1-205ENST00000411884 UBA1P22314 1058 aaKnown RBP3.96□□□□□ -1.78
CLHC1-205ENST00000411884 RRM1P23921 792 aa3.96□□□□□ -1.78
CLHC1-205ENST00000411884 ACADLP28330 430 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms