RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SNX10Q9Y5X0 201 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 PIAS3Q9Y6X2 628 aa5.01□□□□□ -1.61
SCN3A-203ENST00000409101 PRR5-ARHGAP8B1AHC4 643 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 CNMDO75829 334 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 TBX18O95935 607 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 GRIA2P42262 883 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PRKG2Q13237 762 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PLEKHG6Q3KR16 790 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 CCNYL2Q5T2Q4 361 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 DUPD1Q68J44 220 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 BRAT1Q6PJG6 821 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 FOXR2Q6PJQ5 311 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 CASP12Q6UXS9 341 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 CERS6Q6ZMG9 384 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 TMEM26Q6ZUK4 368 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PLD3Q8IV08 490 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ZC3H7AQ8IWR0 971 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 FAM126BQ8IXS8 530 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PRSS58Q8IYP2 241 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 AGGF1Q8N302 714 aaeCLIP5□□□□□ -1.61
SCN3A-203ENST00000409101 PCDH20Q8N6Y1 951 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 AZIN2Q96A70 460 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 SLC22A18Q96BI1 424 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PPCDCQ96CD2 204 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 NDC1Q9BTX1 674 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 WDR6Q9NNW5 1121 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 PAPOLBQ9NRJ5 636 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 NINJ2Q9NZG7 142 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 RRP15Q9Y3B9 282 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 PCDHGC4Q9Y5F7 938 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 RGPD8O14715 1765 aaPredicted RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 PRMT5O14744 637 aaPredicted RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 OR1F1O43749 312 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 GMFGO60234 142 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ALBP02768 609 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ZSCAN5DPP0CG00 497 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ACP5P13686 325 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 RPL22P35268 128 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 ABCG1P45844 678 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 IRX1P78414 480 aaPredicted RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 FASTKQ14296 549 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 PAPD7Q5XG87 772 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 RIPOR1Q6ZS17 1223 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ABHD13Q7L211 337 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 SERPINA9Q86WD7 417 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 LIX1Q8N485 282 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PTCD2Q8WV60 388 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 FOXJ1Q92949 421 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PSMG2Q969U7 264 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 GAL3ST4Q96RP7 486 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 SLC25A51Q9H1U9 297 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 SPATS2LQ9NUQ6 558 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 MKL2Q9ULH7 1088 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 MTF2Q9Y483 593 aaPredicted RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 ILVBLA1L0T0 632 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 CAPN14A8MX76 684 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 C9IYK1 514 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PIGNO95427 931 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 MT-CYBP00156 380 aaPredicted RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF23P17027 643 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PSMC3P17980 439 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 TFEBP19484 476 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 SSTR1P30872 391 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 DPP6P42658 865 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 SERPINB10P48595 397 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 FAAP100Q0VG06 881 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 KCNMA1Q12791 1236 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 DNAJC3Q13217 504 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 MYLK3Q32MK0 819 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 TCEAL5Q5H9L2 206 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 INTS11Q5TA45 600 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 SLC30A9Q6PML9 568 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 BBS12Q6ZW61 710 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 TMEM126BQ8IUX1 230 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 CMTM8Q8IZV2 173 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 OR52L1Q8NGH7 329 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF514Q96K75 400 aaPredicted RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 MRPL57Q9BQC6 102 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 TMEM120AQ9BXJ8 343 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ADAM7Q9H2U9 754 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ADAMTS10Q9H324 1103 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 MCCC2Q9HCC0 563 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ERVK-5Q9HDB9 667 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 EXOSC4Q9NPD3 245 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 KLC4Q9NSK0 619 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 DNAJB4Q9UDY4 337 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 PRKAB1Q9Y478 270 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 TOPAZ1Q8N9V7 1692 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 TMEM150CB9EJG8 249 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 RIPK2O43353 540 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 LRIG2O94898 1065 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF132P52740 706 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 TRIM40Q6P9F5 258 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 KREMEN1Q96MU8 473 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 ZNF599Q96NL3 588 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 QKIQ96PU8 341 aaKnown RBP eCLIP5□□□□□ -1.61
SCN3A-203ENST00000409101 NELL2Q99435 816 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 RIOK2Q9BVS4 552 aaKnown RBP5□□□□□ -1.61
SCN3A-203ENST00000409101 GPR174Q9BXC1 333 aa5□□□□□ -1.61
SCN3A-203ENST00000409101 CCDC134Q9H6E4 229 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms