RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 NPHS1O60500 1241 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 SNUPNO95149 360 aaKnown RBP18.9■□□□□ 0.62
USP39-202ENST00000409025 CHRNGP07510 517 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 ZNF37AP17032 561 aaPredicted RBP18.9■□□□□ 0.62
USP39-202ENST00000409025 IDH3AP50213 366 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 ECT2LQ008S8 904 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 CACNG1Q06432 222 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 CBX2Q14781 532 aaPredicted RBP18.9■□□□□ 0.62
USP39-202ENST00000409025 ARL13AQ5H913 290 aaPredicted RBP18.9■□□□□ 0.62
USP39-202ENST00000409025 PIWIL4Q7Z3Z4 852 aaKnown RBP18.9■□□□□ 0.62
USP39-202ENST00000409025 SLC22A9Q8IVM8 553 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 SPNS2Q8IVW8 549 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 PIANPQ8IYJ0 282 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 ADGRG2Q8IZP9 1017 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 PCDH20Q8N6Y1 951 aaKnown RBP18.9■□□□□ 0.62
USP39-202ENST00000409025 CCNYL1Q8N7R7 359 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 SMG7Q92540 1137 aaKnown RBP18.9■□□□□ 0.62
USP39-202ENST00000409025 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.9■□□□□ 0.62
USP39-202ENST00000409025 TMEM237Q96Q45 408 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 C19orf43Q9BQ61 176 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 MARK1Q9P0L2 795 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 LNPEPQ9UIQ6 1025 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 GBF1Q92538 1859 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 CD1DP15813 335 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 SERPINB5P36952 375 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 RPL14P50914 215 aaKnown RBP18.9■□□□□ 0.62
USP39-202ENST00000409025 ALDH18A1P54886 795 aaKnown RBP18.9■□□□□ 0.62
USP39-202ENST00000409025 XIAPP98170 497 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 PTPRNQ16849 979 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 CARD16Q5EG05 197 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 TRIM67Q6ZTA4 783 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 TAS2R42Q7RTR8 314 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 ADGRD2Q7Z7M1 963 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 ISCA2Q86U28 154 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 CELF5Q8N6W0 485 aaKnown RBP18.9■□□□□ 0.62
USP39-202ENST00000409025 SLC7A6OSQ96CW6 309 aaPredicted RBP18.9■□□□□ 0.62
USP39-202ENST00000409025 EID2BQ96D98 161 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 MOCOSQ96EN8 888 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 RAB3IPQ96QF0 476 aaPredicted RBP18.9■□□□□ 0.62
USP39-202ENST00000409025 ALG9Q9H6U8 611 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 ACSS2Q9NR19 701 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 ARMCX1Q9P291 453 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 SORCS3Q9UPU3 1222 aa18.9■□□□□ 0.62
USP39-202ENST00000409025 C1orf232A0A0U1RR37 186 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 CAPN8A6NHC0 703 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 A8MT66 165 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 BNIP3LO60238 219 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 IPO13O94829 963 aaKnown RBP18.89■□□□□ 0.61
USP39-202ENST00000409025 PYGLP06737 847 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 PKMP14618 531 aaKnown RBP18.89■□□□□ 0.61
USP39-202ENST00000409025 CALB2P22676 271 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 MPSTP25325 297 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 HNF1BP35680 557 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 ELF3P78545 371 aaPredicted RBP18.89■□□□□ 0.61
USP39-202ENST00000409025 RAD51Q06609 339 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 TUBB3Q13509 450 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 TBCCQ15814 346 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 TTC31Q49AM3 519 aaPredicted RBP18.89■□□□□ 0.61
USP39-202ENST00000409025 STK40Q8N2I9 435 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 ITFG1Q8TB96 612 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 PTCD3Q96EY7 689 aaKnown RBP18.89■□□□□ 0.61
USP39-202ENST00000409025 CNDP1Q96KN2 507 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 SLC2A11Q9BYW1 496 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 COG4Q9H9E3 785 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.89■□□□□ 0.61
USP39-202ENST00000409025 MYO7AQ13402 2215 aa18.89■□□□□ 0.61
USP39-202ENST00000409025 NEMP2A6NFY4 417 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 ZBTB14O43829 449 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 DIAPH2O60879 1101 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 POP4O95707 220 aaKnown RBP18.88■□□□□ 0.61
USP39-202ENST00000409025 PTPN4P29074 926 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 PTGER3P43115 390 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 CYB5D1Q6P9G0 228 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 EPGNQ6UW88 154 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 AGR3Q8TD06 166 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 BIRC8Q96P09 236 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 CPEB1Q9BZB8 566 aaKnown RBP18.88■□□□□ 0.61
USP39-202ENST00000409025 SUV39H2Q9H5I1 410 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 FAM50BQ9Y247 325 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 MTF2Q9Y483 593 aaPredicted RBP18.88■□□□□ 0.61
USP39-202ENST00000409025 COMMD10Q9Y6G5 202 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 SLCO1B7G3V0H7 640 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 VPS26AO75436 327 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 ESRRAP11474 423 aaPredicted RBP18.88■□□□□ 0.61
USP39-202ENST00000409025 POLR2EP19388 210 aaKnown RBP18.88■□□□□ 0.61
USP39-202ENST00000409025 CCR10P46092 362 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 CCNHP51946 323 aaPredicted RBP18.88■□□□□ 0.61
USP39-202ENST00000409025 VWA5B1Q5TIE3 1220 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 CERS6Q6ZMG9 384 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 ADIPOR2Q86V24 386 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 LSMEM2Q8N112 164 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 AHI1Q8N157 1196 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 FAM136AQ96C01 138 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 CERS4Q9HA82 394 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 CYP4F12Q9HCS2 524 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 SLCO3A1Q9UIG8 710 aa18.88■□□□□ 0.61
USP39-202ENST00000409025 BPTFQ12830 3046 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 CAPN14A8MX76 684 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 MATN2O00339 956 aa18.87■□□□□ 0.61
USP39-202ENST00000409025 OR1I1O60431 355 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms