RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 ZNF549Q6P9A3 640 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 TMEM25Q86YD3 366 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 SPATA6LQ8N4H0 392 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 PNPLA1Q8N8W4 532 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 CCDC126Q96EE4 140 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 RILPQ96NA2 401 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 NR1H4Q96RI1 486 aaPredicted RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 AARSD1Q9BTE6 412 aaKnown RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 DRC3Q9H069 523 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 ATP13A3Q9H7F0 1226 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 PNPOQ9NVS9 261 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 POLR3BQ9NW08 1133 aaPredicted RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 DNAJC28Q9NX36 388 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 STX18Q9P2W9 335 aaKnown RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 EVLQ9UI08 416 aaPredicted RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 SCOCQ9UIL1 159 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 PKP3Q9Y446 797 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 ZNF711Q9Y462 761 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 GBF1Q92538 1859 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 MYOFQ9NZM1 2061 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 GSC2O15499 205 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 HTRA2O43464 458 aaPredicted RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 MAGEC1O60732 1142 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 SNUPNO95149 360 aaKnown RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 MYOGP15173 224 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 TCF3P15923 654 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 HLA-FP30511 346 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 TTPAP49638 278 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 SUOXP51687 545 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 RAP1GDS1P52306 607 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 HK2P52789 917 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 SH3BGRP55822 239 aaPredicted RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 DNAJB13P59910 316 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 SNRPD1P62314 119 aaKnown RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 RCN2Q14257 317 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 TBCCQ15814 346 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 ZNF77Q15935 545 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 CCDC6Q16204 474 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 TECRLQ5HYJ1 363 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 AARS2Q5JTZ9 985 aaKnown RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 SPRED2Q7Z698 418 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 GRASPQ7Z6J2 395 aaPredicted RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 ALYREFQ86V81 257 aaKnown RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 CAMK1DQ8IU85 385 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 GALNT15Q8N3T1 639 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 PAF1Q8N7H5 531 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 OR2AP1Q8NGE2 309 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 RIN3Q8TB24 985 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 PIH1D2Q8WWB5 315 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 IRF7Q92985 503 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 ISG20Q96AZ6 181 aaKnown RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 OTUB2Q96DC9 234 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 SMIM14Q96QK8 99 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 BBS2Q9BXC9 721 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 GPR63Q9BZJ6 419 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 ILKAPQ9H0C8 392 aaPredicted RBP11.81□□□□□ -0.52
SMS-202ENST00000404933 CCDC68Q9H2F9 335 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 PDP2Q9P2J9 529 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 FKBPLQ9UIM3 349 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 SLC25A13Q9UJS0 675 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 HS3ST2Q9Y278 367 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 NUMBLQ9Y6R0 609 aa11.81□□□□□ -0.52
SMS-202ENST00000404933 LAMA2P24043 3122 aaKnown RBP11.8□□□□□ -0.52
SMS-202ENST00000404933 UBA6A0AVT1 1052 aaPredicted RBP11.8□□□□□ -0.52
SMS-202ENST00000404933 MAGEA13PA6NCF6 341 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 NEDD8-MDP1E9PL57 170 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 ARHGEF15O94989 841 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 CBX6O95503 412 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 PRAMEF12O95522 483 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 SERPINA6P08185 405 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 SRCP12931 536 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 SERPINA4P29622 427 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 MC4RP32245 332 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 HMGCLP35914 325 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 SERPINB5P36952 375 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 NAGLUP54802 743 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 NTHL1P78549 312 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 PFKPQ01813 784 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 SULT2A1Q06520 285 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 USP4Q13107 963 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 DMC1Q14565 340 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 CWF19L1Q69YN2 538 aaKnown RBP11.8□□□□□ -0.52
SMS-202ENST00000404933 ATG14Q6ZNE5 492 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 OR6K2Q8NGY2 324 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 KCNV2Q8TDN2 545 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 ANKRD49Q8WVL7 239 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 LPGAT1Q92604 370 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 C19orf43Q9BQ61 176 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 HTATIP2Q9BUP3 242 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 CADM1Q9BY67 442 aaKnown RBP11.8□□□□□ -0.52
SMS-202ENST00000404933 UNKQ9C0B0 810 aaKnown RBP11.8□□□□□ -0.52
SMS-202ENST00000404933 CEP44Q9C0F1 390 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 NMUR2Q9GZQ4 415 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 CDH19Q9H159 772 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 SPHK2Q9NRA0 654 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 IL17CQ9P0M4 197 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 ANGPTL2Q9UKU9 493 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 SORCS3Q9UPU3 1222 aa11.8□□□□□ -0.52
SMS-202ENST00000404933 APOBEC2Q9Y235 224 aaKnown RBP11.8□□□□□ -0.52
SMS-202ENST00000404933 RAP2CQ9Y3L5 183 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms