RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 SPASTQ9UBP0 616 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 SHOC2Q9UQ13 582 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 ZNF711Q9Y462 761 aa19.14■□□□□ 0.65
RTN4-207ENST00000402434 RASGRP1O95267 797 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 LDOC1O95751 146 aaPredicted RBP19.13■□□□□ 0.65
RTN4-207ENST00000402434 FGF1P05230 155 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 PMLP29590 882 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 TNNT3P45378 269 aaPredicted RBP19.13■□□□□ 0.65
RTN4-207ENST00000402434 GPR1P46091 355 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 PRPSAP1Q14558 356 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 CCNG2Q16589 344 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 PARP6Q2NL67 630 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 PRRT3Q5FWE3 981 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 HENMT1Q5T8I9 393 aaKnown RBP19.13■□□□□ 0.65
RTN4-207ENST00000402434 KCTD16Q68DU8 428 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 NYAP1Q6ZVC0 841 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 SLCO6A1Q86UG4 719 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 HID1Q8IV36 788 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 C1orf54Q8WWF1 131 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 AGAP2Q99490 1192 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 LRRC61Q9BV99 259 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 RIOK2Q9BVS4 552 aaKnown RBP19.13■□□□□ 0.65
RTN4-207ENST00000402434 GPR63Q9BZJ6 419 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 FGF22Q9HCT0 170 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 TRMT1Q9NXH9 659 aaKnown RBP19.13■□□□□ 0.65
RTN4-207ENST00000402434 NFKBIL1Q9UBC1 381 aaPredicted RBP19.13■□□□□ 0.65
RTN4-207ENST00000402434 KLQ9UEF7 1012 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 ZKSCAN5Q9Y2L8 839 aa19.13■□□□□ 0.65
RTN4-207ENST00000402434 TPP1O14773 563 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 AURKAO14965 403 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 SIGLEC6O43699 453 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 AGTP01019 485 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 FGGP02679 453 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 FTH1P19P0C7X4 201 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 CXCR5P32302 372 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 HMGCLP35914 325 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 DCDC1P59894 354 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 P3H1Q32P28 736 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 PROX2Q3B8N5 592 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 ZNF569Q5MCW4 686 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 DRICH1Q6PGQ1 229 aaPredicted RBP19.12■□□□□ 0.65
RTN4-207ENST00000402434 ARHGEF18Q6ZSZ5 1173 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 SDR16C5Q8N3Y7 309 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 FSTL5Q8N475 847 aaPredicted RBP19.12■□□□□ 0.65
RTN4-207ENST00000402434 SLC25A41Q8N5S1 370 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 MAIP1Q8WWC4 291 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 OR1E3Q8WZA6 343 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 CNDP2Q96KP4 475 aaKnown RBP19.12■□□□□ 0.65
RTN4-207ENST00000402434 DUSP23Q9BVJ7 150 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 FRMD8Q9BZ67 464 aaPredicted RBP19.12■□□□□ 0.65
RTN4-207ENST00000402434 CLPBQ9H078 707 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 RAD18Q9NS91 495 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 HACD3Q9P035 362 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 WASF3Q9UPY6 502 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 APOBEC2Q9Y235 224 aaKnown RBP19.12■□□□□ 0.65
RTN4-207ENST00000402434 LRP4O75096 1905 aa19.12■□□□□ 0.65
RTN4-207ENST00000402434 GOLGA6CA6NDK9 693 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 GOLGA6BA6NDN3 693 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 LMO7DNF2Z398 122 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 ENC1O14682 589 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 FFAR2O15552 330 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 GOLGA6DP0CG33 693 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 ALPPL2P10696 532 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 KCTD11Q693B1 232 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 RD3Q7Z3Z2 195 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 TTC30BQ8N4P2 665 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 FAM181AQ8N9Y4 354 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 GPR26Q8NDV2 337 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 LMX1AQ8TE12 382 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 PDXPQ96GD0 296 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 COX14Q96I36 57 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 FICDQ9BVA6 458 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 ARNT2Q9HBZ2 717 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 GOLGA6AQ9NYA3 693 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 SLC17A4Q9Y2C5 497 aa19.11■□□□□ 0.65
RTN4-207ENST00000402434 PRSS38A1L453 326 aa19.1■□□□□ 0.65
RTN4-207ENST00000402434 KIF5CO60282 957 aa19.1■□□□□ 0.65
RTN4-207ENST00000402434 CEP104O60308 925 aa19.1■□□□□ 0.65
RTN4-207ENST00000402434 TRIM16O95361 564 aa19.1■□□□□ 0.65
RTN4-207ENST00000402434 METTL18O95568 372 aa19.1■□□□□ 0.65
RTN4-207ENST00000402434 TNFP01375 233 aa19.1■□□□□ 0.65
RTN4-207ENST00000402434 FUCA1P04066 466 aa19.1■□□□□ 0.65
RTN4-207ENST00000402434 CEACAM5P06731 702 aa19.1■□□□□ 0.65
RTN4-207ENST00000402434 CKMT2P17540 419 aa19.1■□□□□ 0.65
RTN4-207ENST00000402434 SLC35F6Q8N357 371 aa19.1■□□□□ 0.65
RTN4-207ENST00000402434 RASGEF1CQ8N431 466 aa19.1■□□□□ 0.65
RTN4-207ENST00000402434 HIC2Q96JB3 615 aa19.1■□□□□ 0.65
RTN4-207ENST00000402434 MRPL40Q9NQ50 206 aaKnown RBP19.1■□□□□ 0.65
RTN4-207ENST00000402434 CNOT6Q9ULM6 557 aaKnown RBP19.1■□□□□ 0.65
RTN4-207ENST00000402434 ZNF148Q9UQR1 794 aa19.1■□□□□ 0.65
RTN4-207ENST00000402434 DRG1Q9Y295 367 aaKnown RBP19.1■□□□□ 0.65
RTN4-207ENST00000402434 YY2O15391 372 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 BPIP17213 487 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 MSNP26038 577 aaKnown RBP19.09■□□□□ 0.65
RTN4-207ENST00000402434 MSLNQ13421 630 aaPredicted RBP19.09■□□□□ 0.65
RTN4-207ENST00000402434 C1orf61Q13536 156 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 ELOCQ15369 112 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 HS1BP3Q53T59 392 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 DENND5AQ6IQ26 1287 aa19.09■□□□□ 0.65
RTN4-207ENST00000402434 LVRNQ6Q4G3 990 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms