RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 NDUFAF1Q9Y375 327 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 SQORQ9Y6N5 450 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 BRCA1P38398 1863 aaKnown RBP20.94■□□□□ 0.94
CTCF-202ENST00000401394 C1orf232A0A0U1RR37 186 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 H0Y858 1186 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 GABRDO14764 452 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 BRCC3P46736 316 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 LAPTM5Q13571 262 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 SLC44A4Q53GD3 710 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 CILP2Q8IUL8 1156 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 LRRC43Q8N309 656 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 CASP10Q92851 521 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 MYLPFQ96A32 169 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 RNF145Q96MT1 663 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 CDK15Q96Q40 435 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 TLR9Q9NR96 1032 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 ASB1Q9Y576 335 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 MTSS1O43312 755 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 CCR1P32246 355 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 PTPRRQ15256 657 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 CYP2A13Q16696 494 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 UGT3A1Q6NUS8 523 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 C16orf87Q6PH81 154 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 LRRTM3Q86VH5 581 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 PHYKPLQ8IUZ5 450 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 KIAA2013Q8IYS2 634 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 VAT1Q99536 393 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 KATNBL1Q9H079 304 aa20.94■□□□□ 0.94
CTCF-202ENST00000401394 TSPYL2Q9H2G4 693 aaPredicted RBP20.94■□□□□ 0.94
CTCF-202ENST00000401394 TOR1BO14657 336 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 XYLBO75191 536 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 RSL1D1O76021 490 aaKnown RBP20.93■□□□□ 0.94
CTCF-202ENST00000401394 CNTN5O94779 1100 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 GFAPP14136 432 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 IL10P22301 178 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 GJA5P36382 358 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 OR4D2P58180 307 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 ATP6AP1Q15904 470 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 TIGD2Q4W5G0 525 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 DCLRE1AQ6PJP8 1040 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 CENPSQ8N2Z9 138 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 OR13C4Q8NGS5 318 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 ITCHQ96J02 903 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 IL12RB2Q99665 862 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 GALPQ9UBC7 116 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 SLC27A5Q9Y2P5 690 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 TANC1Q9C0D5 1861 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 ASB14A6NK59 587 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 CACNG3O60359 315 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 S1PR4O95977 384 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 OR4Q2P0C623 313 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 MTHFD2P13995 350 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 AXLP30530 894 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 HCAR3P49019 387 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 C21orf59P57076 290 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 BEX3Q00994 111 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 LIPEQ05469 1076 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 NFYCQ13952 458 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 SELPLGQ14242 412 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 IMPG1Q17R60 797 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 GALNT18Q6P9A2 607 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 DHRS4L2Q6PKH6 230 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 FAM86B1Q8N7N1 296 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 ACDQ96AP0 544 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 MYRFLQ96LU7 910 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 CNGB3Q9NQW8 809 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 RGS18Q9NS28 235 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 TRNAU1APQ9NX07 287 aaKnown RBP20.93■□□□□ 0.94
CTCF-202ENST00000401394 IFT80Q9P2H3 777 aaPredicted RBP20.93■□□□□ 0.94
CTCF-202ENST00000401394 SH3GLB1Q9Y371 365 aa20.93■□□□□ 0.94
CTCF-202ENST00000401394 H0YJX3 145 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 ANXA9O76027 345 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 ITGADQ13349 1161 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 ACAP2Q15057 778 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 ARTNQ5T4W7 220 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 ERO1BQ86YB8 467 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 OR10Q1Q8NGQ4 319 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 CDCA5Q96FF9 252 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 MATN3O15232 486 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 ADAM23O75077 832 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 KPNA1P52294 538 aaPredicted RBP20.92■□□□□ 0.94
CTCF-202ENST00000401394 KIAA0930Q6ICG6 404 aaPredicted RBP20.92■□□□□ 0.94
CTCF-202ENST00000401394 DCDC5Q6ZRR9 648 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 DHRSXQ8N5I4 330 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 TOP1MTQ969P6 601 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 CENPNQ96H22 339 aaPredicted RBP20.92■□□□□ 0.94
CTCF-202ENST00000401394 ALG2Q9H553 416 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 FAM124BQ9H5Z6 455 aaPredicted RBP20.92■□□□□ 0.94
CTCF-202ENST00000401394 NOL6Q9H6R4 1146 aaKnown RBP20.92■□□□□ 0.94
CTCF-202ENST00000401394 COQ6Q9Y2Z9 468 aa20.92■□□□□ 0.94
CTCF-202ENST00000401394 OAS3Q9Y6K5 1087 aaKnown RBP20.92■□□□□ 0.94
CTCF-202ENST00000401394 CCNCP24863 283 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 GGT5P36269 586 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 BFSP2Q13515 415 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 MIER2Q8N344 545 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 MFSD2AQ8NA29 543 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 PCYOX1LQ8NBM8 494 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 BLOC1S5Q8TDH9 187 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 GPR152Q8TDT2 470 aa20.91■□□□□ 0.94
CTCF-202ENST00000401394 RTP3Q9BQQ7 232 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms