RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 PPP3CCP48454 512 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 TMED10P49755 219 aaKnown RBP13.48□□□□□ -0.25
SIRPA-203ENST00000400068 ESRRGP62508 458 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 ECT2LQ008S8 904 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 TLE2Q04725 743 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 PAQR3Q6TCH7 311 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 CAMK1DQ8IU85 385 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 PCDHAC1Q9H158 963 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 ADNPQ9H2P0 1102 aa13.48□□□□□ -0.25
SIRPA-203ENST00000400068 MARCH4Q9P2E8 410 aaPredicted RBP13.48□□□□□ -0.25
SIRPA-203ENST00000400068 LRRC14BA6NHZ5 514 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 RPP40O75818 363 aaKnown RBP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 TSPAN9O75954 239 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 SERPIND1P05546 499 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 SNRPB2P08579 225 aaKnown RBP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 SLC10A3P09131 477 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 ATP6V1C1P21283 382 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 NRG1Q02297 640 aaPredicted RBP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 PARP15Q460N3 678 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 RBM23Q86U06 439 aaKnown RBP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 FAM9CQ8IZT9 166 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 SIDT2Q8NBJ9 832 aaKnown RBP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 CDK15Q96Q40 435 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 ZC4H2Q9NQZ6 224 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 WARS2Q9UGM6 360 aaKnown RBP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 SORCS3Q9UPU3 1222 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 VPS9D1Q9Y2B5 631 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 CPQQ9Y646 472 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 AZIN1O14977 448 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 SYN3O14994 580 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 ZNF623O75123 536 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 HALP42357 657 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 PFKPQ01813 784 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 TIGD2Q4W5G0 525 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 ZNF786Q8N393 782 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 CLHC1Q8NHS4 586 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 MAPK15Q8TD08 544 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 JADE3Q92613 823 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 MRGPRX2Q96LB1 330 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 POMPQ9Y244 141 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 FKTNO75072 461 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 ZNF7P17097 686 aaPredicted RBP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 UGT1A6P19224 532 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 UGT1A1P22309 533 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 UGT1A4P22310 534 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 CES1P23141 567 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 UGT1A3P35503 534 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 UGT1A5P35504 534 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 CREB5Q02930 508 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 NIPAL4Q0D2K0 466 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 PGS1Q32NB8 556 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 TMEM135Q86UB9 458 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 DHFR2Q86XF0 187 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 FBXW8Q8N3Y1 598 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 TXNDC5Q8NBS9 432 aaKnown RBP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 ZNF570Q96NI8 536 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 GPR22Q99680 433 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 DHRS4Q9BTZ2 278 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 C2orf49Q9BVC5 232 aaPredicted RBP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 SMG9Q9H0W8 520 aaKnown RBP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 TRIP12Q14669 1992 aaPredicted RBP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 TRIM64CA6NLI5 447 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 ARVCFO00192 962 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 B3GALNT1O75752 331 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 ST8SIA6P61647 398 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 CPSF6Q16630 551 aaKnown RBP eCLIP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 KIAA0930Q6ICG6 404 aaPredicted RBP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 CCSAPQ6IQ19 270 aaPredicted RBP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 UGT3A1Q6NUS8 523 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 FUBP3Q96I24 572 aaKnown RBP eCLIP13.47□□□□□ -0.25
SIRPA-203ENST00000400068 PANX3Q96QZ0 392 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 TRIM8Q9BZR9 551 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 LMCD1Q9NZU5 365 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 CD84Q9UIB8 345 aa13.47□□□□□ -0.25
SIRPA-203ENST00000400068 LINC00854A0A1B0GVQ3 168 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 MYO1GB0I1T2 1018 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 NDST2P52849 883 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 PPP1R3AQ16821 1122 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 FAM126BQ8IXS8 530 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 CLDN19Q8N6F1 224 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 RP9Q8TA86 221 aaKnown RBP13.46□□□□□ -0.25
SIRPA-203ENST00000400068 SH3KBP1Q96B97 665 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 PRPF18Q99633 342 aaKnown RBP13.46□□□□□ -0.25
SIRPA-203ENST00000400068 CCT7Q99832 543 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 SLC25A23Q9BV35 468 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 KCNK13Q9HB14 408 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 DNAJC28Q9NX36 388 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 STX18Q9P2W9 335 aaKnown RBP13.46□□□□□ -0.25
SIRPA-203ENST00000400068 SCML2Q9UQR0 700 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 KPNA3O00505 521 aaPredicted RBP13.46□□□□□ -0.25
SIRPA-203ENST00000400068 ENPP3O14638 875 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 SEC22BO75396 215 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 CLDN11O75508 207 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 PCNAP12004 261 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 YBEYP58557 167 aaPredicted RBP13.46□□□□□ -0.25
SIRPA-203ENST00000400068 FRG1Q14331 258 aaKnown RBP13.46□□□□□ -0.25
SIRPA-203ENST00000400068 CYP51A1Q16850 503 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 KCNA7Q96RP8 456 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 OSBPL10Q9BXB5 764 aa13.46□□□□□ -0.25
SIRPA-203ENST00000400068 S100A14Q9HCY8 104 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms