RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 THOP1P52888 689 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 BASP1P80723 227 aaKnown RBP17.61■□□□□ 0.41
CTNS-203ENST00000399306 SARNPP82979 210 aaKnown RBP17.61■□□□□ 0.41
CTNS-203ENST00000399306 GPS1Q13098 491 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 NFATC4Q14934 902 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 WHAMMP3Q1A5X7 153 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 DENND2CQ68D51 928 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 SPATS2Q86XZ4 545 aaKnown RBP17.61■□□□□ 0.41
CTNS-203ENST00000399306 MINDY1Q8N5J2 469 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 SPATA4Q8NEY3 305 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 KIF18AQ8NI77 898 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 NETO1Q8TDF5 533 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 BLOC1S5Q8TDH9 187 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 PEX13Q92968 403 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 MYOCQ99972 504 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 WDR26Q9H7D7 661 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 PHPT1Q9NRX4 125 aaPredicted RBP17.61■□□□□ 0.41
CTNS-203ENST00000399306 SHOC2Q9UQ13 582 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 CA5BQ9Y2D0 317 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 PKP3Q9Y446 797 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 CEP250Q9BV73 2442 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 ASCC3Q8N3C0 2202 aaKnown RBP17.6■□□□□ 0.41
CTNS-203ENST00000399306 A0A1B0GTQ1 180 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 SMAPO00193 183 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 CACNB4O00305 520 aaPredicted RBP17.6■□□□□ 0.41
CTNS-203ENST00000399306 NDC80O14777 642 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 TNFRSF10CO14798 259 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 USP12O75317 370 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 SOD1P00441 154 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 PCCBP05166 539 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 PIRTP0C851 137 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 MLNP12872 115 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 HADHAP40939 763 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 PTGIRP43119 386 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 SPARCL1Q14515 664 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 KCNJ11Q14654 390 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 PPP1R7Q15435 360 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 HLA-BQ31612 363 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 PPP1R21Q6ZMI0 780 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 NLRP9Q7RTR0 991 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 PCGF5Q86SE9 256 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 PRUNE1Q86TP1 453 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 PARGQ86W56 976 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 SLC22A18ASQ8N1D0 253 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 TRAM1L1Q8N609 369 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 PLA2G15Q8NCC3 412 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 MCUQ8NE86 351 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 RANBP9Q96S59 729 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 APOL2Q9BQE5 337 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 GAREM1Q9H706 876 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.6■□□□□ 0.41
CTNS-203ENST00000399306 TMEM131Q92545 1883 aa17.6■□□□□ 0.41
CTNS-203ENST00000399306 ZNF106Q9H2Y7 1883 aaKnown RBP17.6■□□□□ 0.41
CTNS-203ENST00000399306 AURKAO14965 403 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 STX7O15400 261 aaKnown RBP17.59■□□□□ 0.41
CTNS-203ENST00000399306 PCDHGA12O60330 932 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 MYCLP1P12525 358 aaPredicted RBP17.59■□□□□ 0.41
CTNS-203ENST00000399306 BPIP17213 487 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 GPR1P46091 355 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 NPY2RP49146 381 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 CCT8P50990 548 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 BLKP51451 505 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 DR1Q01658 176 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 OLIG2Q13516 323 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 PDE1CQ14123 709 aaPredicted RBP17.59■□□□□ 0.41
CTNS-203ENST00000399306 FZD2Q14332 565 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 RAET1GQ6H3X3 334 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 LRRC8BQ6P9F7 803 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 DBX2Q6ZNG2 339 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 MAATS1Q7Z4T9 603 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 DNAAF3Q8N9W5 541 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 OR52K1Q8NGK4 314 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 BTN2A2Q8WVV5 523 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 SCAMP4Q969E2 229 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 FUBP1Q96AE4 644 aaKnown RBP17.59■□□□□ 0.41
CTNS-203ENST00000399306 RIOK2Q9BVS4 552 aaKnown RBP17.59■□□□□ 0.41
CTNS-203ENST00000399306 APPL1Q9UKG1 709 aa17.59■□□□□ 0.41
CTNS-203ENST00000399306 A0A0U1RQS6 177 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 HEATR9A2RTY3 570 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 FAM187AA6NFU0 413 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 MROH6A6NGR9 719 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 H7C0S8 307 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 LDB2O43679 373 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 URI1O94763 535 aaPredicted RBP17.58■□□□□ 0.4
CTNS-203ENST00000399306 CSF2P04141 144 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 NME1P15531 152 aaKnown RBP17.58■□□□□ 0.4
CTNS-203ENST00000399306 SPAM1P38567 509 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 ZNF140P52738 457 aaPredicted RBP17.58■□□□□ 0.4
CTNS-203ENST00000399306 HNRNPKP61978 463 aaKnown RBP eCLIP17.58■□□□□ 0.4
CTNS-203ENST00000399306 CDK3Q00526 305 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 SUZ12Q15022 739 aaKnown RBP17.58■□□□□ 0.4
CTNS-203ENST00000399306 TRIP13Q15645 432 aaPredicted RBP17.58■□□□□ 0.4
CTNS-203ENST00000399306 STPG1Q5TH74 334 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 LAYNQ6UX15 382 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 RFLNAQ6ZTI6 216 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 HOOK3Q86VS8 718 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 HEATR4Q86WZ0 1026 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 PPIL6Q8IXY8 311 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 KIAA2013Q8IYS2 634 aa17.58■□□□□ 0.4
CTNS-203ENST00000399306 SDR16C5Q8N3Y7 309 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms