RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 MECRQ9BV79 373 aa16.19■□□□□ 0.18
PCDHA12-201ENST00000398631 DNAJC11Q9NVH1 559 aa16.19■□□□□ 0.18
PCDHA12-201ENST00000398631 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 MATN3O15232 486 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 SLC22A3O75751 556 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 LRATO95237 230 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 JAM2P57087 298 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 FNBP1LQ5T0N5 605 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 CPT1BQ92523 772 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 FUBP3Q96I24 572 aaKnown RBP eCLIP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 MRPS26Q9BYN8 205 aaKnown RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 INTS7Q9NVH2 962 aaKnown RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 ERVW-1Q9UQF0 538 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 TOP3AQ13472 1001 aaPredicted RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 TIGD2Q4W5G0 525 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 ARHGAP36Q6ZRI8 547 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 NMUR1Q9HB89 426 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 PACSIN3Q9UKS6 424 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 ERN1O75460 977 aaKnown RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 POP4O95707 220 aaKnown RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 BMP7P18075 431 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 POU5F1Q01860 360 aaKnown RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 USP4Q13107 963 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 EML3Q32P44 896 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 KIAA0408Q6ZU52 694 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 SCAIQ8N9R8 606 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 MCRS1Q96EZ8 462 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 TBATAQ96M53 351 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 ZNF607Q96SK3 696 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 C3orf14Q9HBI5 128 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 TRMT13Q9NUP7 481 aaKnown RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 C2CD4BA6NLJ0 364 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 LCA5LO95447 670 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 DRD4P21917 467 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 GSTM5P46439 218 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 PSMD8P48556 350 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 ELF3P78545 371 aaPredicted RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 HNRNPDQ14103 355 aaKnown RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 UBAP2LQ14157 1087 aaKnown RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 SPANXN2Q5MJ10 180 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 CCDC185Q8N715 623 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 ARL14EPQ8N8R7 260 aaPredicted RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 RTL3Q8N8U3 475 aaKnown RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 REXO5Q96IC2 774 aaKnown RBP16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 S100A13Q99584 98 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 GSTK1Q9Y2Q3 226 aa16.18■□□□□ 0.18
PCDHA12-201ENST00000398631 NPEPPSL1A6NEC2 478 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 STK16O75716 305 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 IPO13O94829 963 aaKnown RBP16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 NDST2P52849 883 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 HDDC2Q7Z4H3 204 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 BTBD9Q96Q07 612 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 SLC38A2Q96QD8 506 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 DCUN1D5Q9BTE7 237 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 ABCG4Q9H172 646 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 LRMDAQ9H2I8 198 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 RPRD1BQ9NQG5 326 aaKnown RBP16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 PNPOQ9NVS9 261 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 SLC17A7Q9P2U7 560 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 ZFP37Q9Y6Q3 630 aaPredicted RBP16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 ITPKAP23677 461 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 CRHR1P34998 444 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 USP46P62068 366 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 SLC20A2Q08357 652 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 PLD4Q96BZ4 506 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 SPRTNQ9H040 489 aaPredicted RBP16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 LMAN2LQ9H0V9 348 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 POLR1BQ9H9Y6 1135 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 MAP10Q9P2G4 905 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 POLR3HQ9Y535 204 aaPredicted RBP16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 GTPBP1O00178 669 aaKnown RBP16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 NFKBIEO00221 500 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 C8AP07357 584 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 ACLYP53396 1101 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 COX10Q12887 443 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 C16orf72Q14CZ0 275 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 SF1Q15637 639 aaKnown RBP16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 DGUOKQ16854 277 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 CACTIN-AS1Q8N1I8 211 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 ZBTB2Q8N680 514 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 OLFM1Q99784 485 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 SDCBP2Q9H190 292 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 SGK2Q9HBY8 427 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 APOBEC3GQ9HC16 384 aaKnown RBP16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 DUS2Q9NX74 493 aaKnown RBP16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 PLLPQ9Y342 182 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 GMPPBQ9Y5P6 360 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 DHX15O43143 795 aaKnown RBP16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 GNPDA1P46926 289 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 ZNF618Q5T7W0 954 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 ADGRG2Q8IZP9 1017 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 Q96MT0 163 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 GRIP2Q9C0E4 1043 aa16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 PRPF19Q9UMS4 504 aaKnown RBP16.17■□□□□ 0.18
PCDHA12-201ENST00000398631 SLC6A2P23975 617 aa16.16■□□□□ 0.18
PCDHA12-201ENST00000398631 TRAF3Q13114 568 aa16.16■□□□□ 0.18
PCDHA12-201ENST00000398631 DEPDC4Q8N2C3 294 aa16.16■□□□□ 0.18
PCDHA12-201ENST00000398631 SMYD1Q8NB12 490 aa16.16■□□□□ 0.18
PCDHA12-201ENST00000398631 KREMEN2Q8NCW0 462 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms