RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 LAMA2P24043 3122 aaKnown RBP18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ZNF37AP17032 561 aaPredicted RBP18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 HERVK_113P63132 956 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 HPCAP84074 193 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 FOLH1Q04609 750 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 RALGDSQ12967 914 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PFKFB4Q16877 469 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 REP15Q6BDI9 236 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SMYD1Q8NB12 490 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 L3HYPDHQ96EM0 354 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 DCUN1D1Q96GG9 259 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 NSUN5Q96P11 429 aaKnown RBP18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 CASD1Q96PB1 797 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ERVK-6Q9BXR3 956 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 GIMAP2Q9UG22 337 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 FAM50BQ9Y247 325 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SPO11Q9Y5K1 396 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ENPP3O14638 875 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 E2F6O75461 281 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 BCAS2O75934 225 aaPredicted RBP18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 XIAPP98170 497 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 GALNT1Q10472 559 aaPredicted RBP18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ISLR2Q6UXK2 745 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 CDKN2AIPNLQ96HQ2 116 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SH3GLB1Q9Y371 365 aa18.31■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ADAM12O43184 909 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 NBNO60934 754 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 GJB5O95377 273 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SLC26A3P40879 764 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 FOXA1P55317 472 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 NME5P56597 212 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 GNA12Q03113 381 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 STX5Q13190 355 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 LRP8Q14114 963 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 GEN1Q17RS7 908 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 LARP4Q71RC2 724 aaKnown RBP eCLIP18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ZNF554Q86TJ5 538 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 RMDN1Q96DB5 314 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SPATA17Q96L03 361 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PKP2Q99959 881 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 NACA2Q9H009 215 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 STARD7Q9NQZ5 370 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SPATA7Q9P0W8 599 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 RIMS3Q9UJD0 308 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 A0A1W2PQ45 241 aaPredicted RBP18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 A0A1W2PQY0 241 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SLC38A8A6NNN8 435 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PEX1O43933 1283 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ZDHHC11BP0C7U3 371 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 NCCRP1Q6ZVX7 275 aaPredicted RBP18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 LRRC8DQ7L1W4 858 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 C19orf60Q96EN9 201 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 TRIB3Q96RU7 358 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SLC39A3Q9BRY0 314 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 DNAJC15Q9Y5T4 150 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ANKRD12Q6UB98 2062 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 CDK14O94921 469 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 EPOP01588 193 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ALDOCP09972 364 aaKnown RBP18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 MTHFD2P13995 350 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 RPL17P18621 184 aaKnown RBP18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 STC1P52823 247 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 BTG3Q14201 252 aaPredicted RBP18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ADGRE1Q14246 886 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 UGT3A2Q3SY77 523 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 DENND1CQ8IV53 801 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 KCNA7Q96RP8 456 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 TRMOQ9BU70 441 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 MID1IP1Q9NPA3 183 aa18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 FNDC3AQ9Y2H6 1198 aaKnown RBP18.3■□□□□ 0.52
CHRFAM7A-202ENST00000397827 TRIM38O00635 465 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ACSL4O60488 711 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 NDST3O95803 873 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SNRPB2P08579 225 aaKnown RBP18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 FMO4P31512 558 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SP3Q02447 781 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 GPNMBQ14956 572 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PDK3Q15120 406 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 TLR1Q15399 786 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 OR4K2Q8NGD2 314 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 GPR150Q8NGU9 434 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 BCL7CQ8WUZ0 217 aaPredicted RBP18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 C17orf50Q8WW18 174 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 CYP2S1Q96SQ9 504 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 CORO1BQ9BR76 489 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 UTP6Q9NYH9 597 aaKnown RBP18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 CDKN1CP49918 316 aaPredicted RBP18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SGSHP51688 502 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PTPRRQ15256 657 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 RARS2Q5T160 578 aaKnown RBP18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ZFP1Q6P2D0 407 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ST13P4Q8IZP2 240 aaPredicted RBP18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ATP6V1E2Q96A05 226 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ZNF512Q96ME7 567 aaPredicted RBP18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 MGME1Q9BQP7 344 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 AARSD1Q9BTE6 412 aaKnown RBP18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 CINPQ9BW66 212 aaPredicted RBP18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 AKTIPQ9H8T0 292 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 BCAP29Q9UHQ4 241 aa18.29■□□□□ 0.52
CHRFAM7A-202ENST00000397827 AK5Q9Y6K8 562 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms