RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 PPIDQ08752 370 aaKnown RBP18.24■□□□□ 0.51
FXN-203ENST00000396366 HLTFQ14527 1009 aaKnown RBP eCLIP18.24■□□□□ 0.51
FXN-203ENST00000396366 C14orf28Q4W4Y0 310 aa18.24■□□□□ 0.51
FXN-203ENST00000396366 SLC9A4Q6AI14 798 aa18.24■□□□□ 0.51
FXN-203ENST00000396366 WDR48Q8TAF3 677 aa18.24■□□□□ 0.51
FXN-203ENST00000396366 GRAMD1AQ96CP6 724 aa18.24■□□□□ 0.51
FXN-203ENST00000396366 RIOK2Q9BVS4 552 aaKnown RBP18.24■□□□□ 0.51
FXN-203ENST00000396366 EPB41L5Q9HCM4 733 aa18.24■□□□□ 0.51
FXN-203ENST00000396366 AMACRQ9UHK6 382 aa18.24■□□□□ 0.51
FXN-203ENST00000396366 SLC17A4Q9Y2C5 497 aa18.24■□□□□ 0.51
FXN-203ENST00000396366 CAPN8A6NHC0 703 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 AKR1B15C9JRZ8 316 aaPredicted RBP18.23■□□□□ 0.51
FXN-203ENST00000396366 D6RAR5 112 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 TNFSF15O95150 251 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 KRT1P04264 644 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 GLB1P16278 677 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 TEAD1P28347 426 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 RBMS1P29558 406 aaKnown RBP18.23■□□□□ 0.51
FXN-203ENST00000396366 STC1P52823 247 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 SKOR1P84550 965 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 CTBSQ01459 385 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 AP1B1Q10567 949 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 COL9A2Q14055 689 aaPredicted RBP18.23■□□□□ 0.51
FXN-203ENST00000396366 LLGL1Q15334 1064 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 SLC30A9Q6PML9 568 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 ADAMTSL4Q6UY14 1074 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 MARK2Q7KZI7 788 aaKnown RBP18.23■□□□□ 0.51
FXN-203ENST00000396366 TMPRSS9Q7Z410 1059 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 CCNJLQ8IV13 435 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 RHOT2Q8IXI1 618 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 OR6C4Q8NGE1 309 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 WDR36Q8NI36 951 aaKnown RBP18.23■□□□□ 0.51
FXN-203ENST00000396366 PATE1Q8WXA2 126 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 FCRL3Q96P31 734 aaPredicted RBP18.23■□□□□ 0.51
FXN-203ENST00000396366 TAAR2Q9P1P5 351 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 APPL1Q9UKG1 709 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 TFR2Q9UP52 801 aa18.23■□□□□ 0.51
FXN-203ENST00000396366 CCDC187A0A096LP49 1063 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 APOL1O14791 398 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 INPP4BO15327 924 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 B4GAT1O43505 415 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 ECEL1O95672 775 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 KRT10P13645 584 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 HGFP14210 728 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 COMTP21964 271 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 ADCY8P40145 1251 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 DYNLT1P63172 113 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 IFI35P80217 286 aaPredicted RBP18.22■□□□□ 0.51
FXN-203ENST00000396366 QPCTQ16769 361 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 IGF2-ASQ6U949 168 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 KDELC2Q7Z4H8 507 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 SPRED1Q7Z699 444 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 RFX6Q8HWS3 928 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.22■□□□□ 0.51
FXN-203ENST00000396366 ZDHHC1Q8WTX9 485 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 ZNF830Q96NB3 372 aaPredicted RBP18.22■□□□□ 0.51
FXN-203ENST00000396366 WDR24Q96S15 920 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 MAK16Q9BXY0 300 aaKnown RBP18.22■□□□□ 0.51
FXN-203ENST00000396366 GSDMCQ9BYG8 508 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 BRD8Q9H0E9 1235 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 GOLPH3Q9H4A6 298 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 THSD1Q9NS62 852 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 TRNAU1APQ9NX07 287 aaKnown RBP18.22■□□□□ 0.51
FXN-203ENST00000396366 PCDHGA8Q9Y5G5 932 aa18.22■□□□□ 0.51
FXN-203ENST00000396366 PCYT1BQ9Y5K3 369 aaPredicted RBP18.22■□□□□ 0.51
FXN-203ENST00000396366 CDRT15L2A8MXV6 281 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 KLK10O43240 276 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 IVLP07476 585 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 ZNF30P17039 623 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 NOP2P46087 812 aaKnown RBP18.21■□□□□ 0.51
FXN-203ENST00000396366 INHBCP55103 352 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 OR1D5P58170 312 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 CXADRP78310 365 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 B4GALNT1Q00973 533 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 ILF3Q12906 894 aaKnown RBP eCLIP18.21■□□□□ 0.51
FXN-203ENST00000396366 GALNT3Q14435 633 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 MFSD7Q6UXD7 560 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 ZNF765Q7L2R6 523 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 C17orf82Q86X59 251 aaPredicted RBP18.21■□□□□ 0.51
FXN-203ENST00000396366 CNGA4Q8IV77 575 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 ARL14Q8N4G2 192 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 KCNE4Q8WWG9 221 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 SCARF2Q96GP6 870 aaPredicted RBP18.21■□□□□ 0.51
FXN-203ENST00000396366 AGAP3Q96P47 875 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 OLFM3Q96PB7 478 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 CPNE5Q9HCH3 593 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 SEPT10Q9P0V9 454 aa18.21■□□□□ 0.51
FXN-203ENST00000396366 SAE1Q9UBE0 346 aaPredicted RBP18.21■□□□□ 0.51
FXN-203ENST00000396366 CNOT6Q9ULM6 557 aaKnown RBP18.21■□□□□ 0.51
FXN-203ENST00000396366 C1orf232A0A0U1RR37 186 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 ZNF487B1APH4 448 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 ANKRD66B4E2M5 251 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 NUDT21O43809 227 aaKnown RBP18.2■□□□□ 0.5
FXN-203ENST00000396366 ATP1A1P05023 1023 aaKnown RBP18.2■□□□□ 0.5
FXN-203ENST00000396366 PNLIPP16233 465 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 UGT1A5P35504 534 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 RPL26P61254 145 aaKnown RBP18.2■□□□□ 0.5
FXN-203ENST00000396366 TCEAL1Q15170 157 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 LRRC38Q5VT99 294 aa18.2■□□□□ 0.5
FXN-203ENST00000396366 RAB11FIP2Q7L804 512 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms