RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 GLIS3Q8NEA6 775 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 MBOAT7Q96N66 472 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 RBM4BQ9BQ04 359 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 RBM4Q9BWF3 364 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 RHBGQ9H310 441 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 NXF3Q9H4D5 531 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SEC14L3Q9UDX4 400 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SLC27A5Q9Y2P5 690 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 FSCN2O14926 492 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SYN3O14994 580 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 CCNCP24863 283 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 EPHA3P29320 983 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 NDST2P52849 883 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 TARBP2Q15633 366 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 ERICH5Q6P6B1 374 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 TMC8Q8IU68 726 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 RAVER1Q8IY67 606 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 MAB21L3Q8N8X9 362 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 RIT1Q92963 219 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 TDRD1Q9BXT4 1180 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 CRISPLD1Q9H336 500 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SGK2Q9HBY8 427 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 EHD3Q9NZN3 535 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 ADGRE2Q9UHX3 823 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 PGRMC2O15173 223 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 LINC00032P0C843 101 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SLC20A2Q08357 652 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 DPYSQ14117 519 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 MED22Q15528 200 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 KLHL24Q6TFL4 600 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 FAM151BQ6UXP7 276 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 MARK2Q7KZI7 788 aaKnown RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 C12orf50Q8NA57 414 aaPredicted RBP5.45□□□□□ -1.54
VPS13C-204ENST00000395898 COX4I2Q96KJ9 171 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 SLC9A7Q96T83 725 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 ACBD6Q9BR61 282 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 KCNN2Q9H2S1 579 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 HIPK3Q9H422 1215 aa5.45□□□□□ -1.54
VPS13C-204ENST00000395898 IPO13O94829 963 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 C4BPAP04003 597 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 LAG3P18627 525 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PNLIPRP1P54315 467 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ARSHQ5FYA8 562 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 METTL21CQ5VZV1 264 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PTCHD4Q6ZW05 846 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 TMPRSS11BQ86T26 416 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CACUL1Q86Y37 369 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 OR5B17Q8NGF7 314 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 MARK4Q96L34 752 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 GRIP2Q9C0E4 1043 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 MIOSQ9NXC5 875 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 MAP10Q9P2G4 905 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ZNF180Q9UJW8 692 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ZNF490Q9ULM2 529 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PCDHA2Q9Y5H9 948 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 NRP2O60462 931 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CAPN15O75808 1086 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 OR1D2P34982 312 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 NDUFV1P49821 464 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ACLYP53396 1101 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ABRQ12979 859 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 UBAP2LQ14157 1087 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 NDUFA9Q16795 377 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CRY2Q49AN0 593 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CPTPQ5TA50 214 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ZNF697Q5TEC3 545 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ZNF563Q8TA94 476 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 LNX1Q8TBB1 728 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ZHX1-C8orf76Q96EF9 292 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 DHX33Q9H6R0 707 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 NEDD8-MDP1E9PL57 170 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 MPZL2O60487 215 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 APODP05090 189 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PRKAR1AP10644 381 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 HEPACAMQ14CZ8 416 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 BICRALQ6AI39 1079 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 CDH24Q86UP0 819 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ADGRG2Q8IZP9 1017 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 NARS2Q96I59 477 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 SEZ6LQ9BYH1 1024 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PCBD2Q9H0N5 130 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ACP6Q9NPH0 428 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 DUSP11O75319 330 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 AP2A1O95782 977 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ADSLP30566 484 aaPredicted RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 SLC25A3Q00325 362 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 PDK3Q15120 406 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 ATP13A4Q4VNC1 1196 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 MFSD5Q6N075 450 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 FBXO42Q6P3S6 717 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 C2orf15Q8WU43 125 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 KCTD4Q8WVF5 259 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 UPF1Q92900 1129 aaKnown RBP eCLIP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 MYO19Q96H55 970 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 BTBD9Q96Q07 612 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 NIFKQ9BYG3 293 aaKnown RBP5.44□□□□□ -1.54
VPS13C-204ENST00000395898 LRTM1Q9HBL6 345 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 AASDHPPTQ9NRN7 309 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 RASSF1Q9NS23 344 aa5.44□□□□□ -1.54
VPS13C-204ENST00000395898 A0A1B0GVM2 712 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms