RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 MAP10Q9P2G4 905 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 HPCAL4Q9UM19 191 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 NTNG1Q9Y2I2 539 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 ATP6V1DQ9Y5K8 247 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 ZGRF1Q86YA3 2104 aa13.6□□□□□ -0.23
VCPKMT-201ENST00000395859 A0A1B0GVL5 298 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 SSU72P8A0A1W2PR75 194 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 PRSS44E7EML9 344 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 FAM72CH0Y354 149 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 LRRTM2O43300 516 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 BUB1O43683 1085 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 ZG16O60844 167 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 DIAPH2O60879 1101 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 RAMP2O60895 175 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 SPAG6O75602 509 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 ELFN1P0C7U0 828 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 KRT5P13647 590 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 TEAD1P28347 426 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 ERCC5P28715 1186 aaPredicted RBP13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 PTPN4P29074 926 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 FLT3P36888 993 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 PTGIRP43119 386 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 NOP2P46087 812 aaKnown RBP13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 RPS18P62269 152 aaKnown RBP13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 FOXM1Q08050 763 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 GRM3Q14832 879 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 COBLL1Q53SF7 1204 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 FAM72AQ5TYM5 149 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 FAM72DQ6L9T8 149 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 SYVN1Q86TM6 617 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 FAM72BQ86X60 149 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 DNAAF5Q86Y56 855 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 ZDHHC17Q8IUH5 632 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 GLIS1Q8NBF1 620 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 ST6GALNAC3Q8NDV1 305 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 C9orf72Q96LT7 481 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 PHPT1Q9NRX4 125 aaPredicted RBP13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 OGFRQ9NZT2 677 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 OR12D3Q9UGF7 316 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 RCOR1Q9UKL0 485 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 ITGB1BP2Q9UKP3 347 aa13.59□□□□□ -0.23
VCPKMT-201ENST00000395859 FAM237AA0A1B0GTK4 181 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 GOLGA6L22H0YM25 854 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 TIAF1O95411 115 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 CCNYL3P0C7X3 344 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 CMA1P23946 247 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 SCNN1AP37088 669 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 PRCPP42785 496 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 GFERP55789 205 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 HHEXQ03014 270 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 ZNF517Q6ZMY9 492 aaPredicted RBP13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 FAM131BQ86XD5 332 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 SPOCK2Q92563 424 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 CCDC47Q96A33 483 aaKnown RBP13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 NSMCE3Q96MG7 304 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 OR6C1Q96RD1 312 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 TUBGCP5Q96RT8 1024 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 MAGEB5Q9BZ81 275 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 GTPBP4Q9BZE4 634 aaKnown RBP13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 TRIM8Q9BZR9 551 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 ZMYND15Q9H091 742 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 EPB41L1Q9H4G0 881 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 KLHL3Q9UH77 587 aa13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 MDC1Q14676 2089 aaKnown RBP13.58□□□□□ -0.24
VCPKMT-201ENST00000395859 TRBV23OR9-2A0A075B6M9 112 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 E2F3O00716 465 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 TOX3O15405 576 aaPredicted RBP13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 LRIG2O94898 1065 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 SOD1P00441 154 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 MT-ND3P03897 115 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 GABRB2P47870 512 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 PYCR3Q53H96 274 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 RAB6CQ53S08 254 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 ATL3Q6DD88 541 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 PASD1Q8IV76 773 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 MMP21Q8N119 569 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 UBE2Q2Q8WVN8 375 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 OR2M4Q96R27 311 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 RAB6CQ9H0N0 254 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 PDFQ9HBH1 243 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 LNPEPQ9UIQ6 1025 aa13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 KLF2Q9Y5W3 355 aaPredicted RBP13.57□□□□□ -0.24
VCPKMT-201ENST00000395859 TRIM49BA6NDI0 452 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 TRAFD1O14545 582 aaPredicted RBP13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 HNRNPH3P31942 346 aaKnown RBP13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 ADRA1BP35368 520 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 RGRP47804 291 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 CSNK1DP48730 415 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 PER3P56645 1201 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 CDK18Q07002 472 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 ART3Q13508 389 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 ELOAQ14241 798 aaKnown RBP13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 MIIPQ5JXC2 388 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 IYDQ6PHW0 289 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 PLXDC1Q8IUK5 500 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 RASGRP3Q8IV61 690 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 ZNF295-AS1Q8N0V1 137 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 NUS1Q96E22 293 aa13.56□□□□□ -0.24
VCPKMT-201ENST00000395859 NCAPGQ9BPX3 1015 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms