RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 TNIP3Q96KP6 325 aa16.4■□□□□ 0.22
EFEMP1-202ENST00000394555 NSUN5Q96P11 429 aaKnown RBP16.4■□□□□ 0.22
EFEMP1-202ENST00000394555 COLEC11Q9BWP8 271 aa16.4■□□□□ 0.22
EFEMP1-202ENST00000394555 ZNF112Q9UJU3 913 aa16.4■□□□□ 0.22
EFEMP1-202ENST00000394555 CPQQ9Y646 472 aa16.4■□□□□ 0.22
EFEMP1-202ENST00000394555 IQCA1LA6NCM1 817 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 SEC14L2O76054 403 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 RECQL4O94761 1208 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 CPNE6O95741 557 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 ADARB1P78563 741 aaKnown RBP16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 ECT2LQ008S8 904 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 POLD3Q15054 466 aaPredicted RBP16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 HABP4Q5JVS0 413 aaKnown RBP16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 HECTD2Q5U5R9 776 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 CLEC20AQ6ZU45 233 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 HERC2P3Q9BVR0 1158 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 FAM49AQ9H0Q0 323 aaPredicted RBP16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 INTS10Q9NVR2 710 aaKnown RBP16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 GIN1Q9NXP7 522 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 CRYL1Q9Y2S2 319 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 TRIM64BA6NI03 449 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 MAN1A2O60476 641 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 DPEP1P16444 411 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 OCA2Q04671 838 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 DNASE1L3Q13609 305 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 ACAP2Q15057 778 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 ZNF484Q5JVG2 852 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 XAF1Q6GPH4 301 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 CRTC3Q6UUV7 619 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 CATSPER4Q7RTX7 472 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 STK32CQ86UX6 486 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 CCDC138Q96M89 665 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 SLC2A13Q96QE2 648 aa16.39■□□□□ 0.21
EFEMP1-202ENST00000394555 LGALS2P05162 132 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 TMEM207Q6UWW9 146 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 GADL1Q6ZQY3 521 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 USP51Q70EK9 711 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 BNIPLQ7Z465 357 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 TBC1D21Q8IYX1 336 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 SLC7A5P1Q8MH63 180 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 ATPAF2Q8N5M1 289 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 PTGR2Q8N8N7 351 aaPredicted RBP16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 TMEM125Q96AQ2 219 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 ALPK1Q96QP1 1244 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 EVLQ9UI08 416 aaPredicted RBP16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 PCDHA9Q9Y5H5 950 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 MCM3APO60318 1980 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 CDK14O94921 469 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 OXSR1O95747 527 aaPredicted RBP16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 GMPSP49915 693 aaPredicted RBP16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 ATP4BP51164 291 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 CDKN2DP55273 166 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 KCNC4Q03721 635 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 ZBTB6Q15916 424 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 PFKFB4Q16877 469 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 PGS1Q32NB8 556 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 GPRIN1Q7Z2K8 1008 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 RALGPS2Q86X27 583 aaPredicted RBP16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 BIRC7Q96CA5 298 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 TEX37Q96LM6 180 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 CCDC90BQ9GZT6 254 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 KLHL25Q9H0H3 589 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 GLOD4Q9HC38 313 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 VWA7Q9Y334 891 aa16.38■□□□□ 0.21
EFEMP1-202ENST00000394555 CLDN25C9JDP6 229 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 PSMD3O43242 534 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 ANXA9O76027 345 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 C7P10643 843 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 AQP6Q13520 282 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 PAGE3Q5JUK9 113 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 SCIMPQ6UWF3 145 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 PAQR9Q6ZVX9 377 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 ISCA2Q86U28 154 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 IFNLR1Q8IU57 520 aaPredicted RBP16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 KLRG1Q96E93 195 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 SH3YL1Q96HL8 342 aaPredicted RBP16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 BDH2Q9BUT1 245 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 FUNDC2Q9BWH2 189 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 RBM47A0AV96 593 aaKnown RBP16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 PTGES3LE9PB15 166 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 AZIN1O14977 448 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 BCAS1O75363 584 aaPredicted RBP16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 ZNF24P17028 368 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 HOXA11P31270 313 aaPredicted RBP16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 HPCAL1P37235 193 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 ARMCX2Q7L311 632 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 CADM3Q8N126 398 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 PARP8Q8N3A8 854 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 PNPT1Q8TCS8 783 aaKnown RBP16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 NTAN1Q96AB6 310 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 PTERQ96BW5 349 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 ITPKCQ96DU7 683 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 CAMKK2Q96RR4 588 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 SLC9A7Q96T83 725 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 TDRD1Q9BXT4 1180 aaKnown RBP16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 TREX1Q9NSU2 369 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 CACNG4Q9UBN1 327 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 TIMM22Q9Y584 194 aa16.37■□□□□ 0.21
EFEMP1-202ENST00000394555 TCRBV5S2A0A599 114 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms