RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 CCDC78A2IDD5 438 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 BBIP1A8MTZ0 92 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 TEX28O15482 410 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 NPHS1O60500 1241 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 HOXA11P31270 313 aaPredicted RBP18.84■□□□□ 0.61
HOXC6-202ENST00000394331 VAC14Q08AM6 782 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 SOWAHAQ2M3V2 549 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 CATSPER4Q7RTX7 472 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 PRSS48Q7RTY5 328 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 ZNF467Q7Z7K2 595 aaPredicted RBP18.84■□□□□ 0.61
HOXC6-202ENST00000394331 HACE1Q8IYU2 909 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 CSPG4P5Q96PW8 444 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 WARS2Q9UGM6 360 aaKnown RBP18.84■□□□□ 0.61
HOXC6-202ENST00000394331 FAM149AA5PLN7 773 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 SNAP29O95721 258 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 ALBP02768 609 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 LRPAP1P30533 357 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 RPL34P49207 117 aaKnown RBP18.84■□□□□ 0.61
HOXC6-202ENST00000394331 ATP4BP51164 291 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 FAM182AQ5T1J6 154 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 FSTL4Q6MZW2 842 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 LYSMD2Q8IV50 215 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 CRYBG2Q8N1P7 616 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 URGCPQ8TCY9 931 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 HOPXQ9BPY8 73 aaPredicted RBP18.84■□□□□ 0.61
HOXC6-202ENST00000394331 MTF2Q9Y483 593 aaPredicted RBP18.84■□□□□ 0.61
HOXC6-202ENST00000394331 HACD1B0YJ81 288 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 GPC4O75487 556 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 KRT8P05787 483 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 POLBP06746 335 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 ELK4P28324 431 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 GMPRP36959 345 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 ALDH7A1P49419 539 aaKnown RBP18.84■□□□□ 0.61
HOXC6-202ENST00000394331 PLCL1Q15111 1095 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 C9orf57Q5W0N0 161 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 NOTUMQ6P988 496 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 STRADAQ7RTN6 431 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 RAVER1Q8IY67 606 aaKnown RBP18.84■□□□□ 0.61
HOXC6-202ENST00000394331 OR7A2PQ8NGA2 310 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 HSFY1Q96LI6 401 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 LRRC4Q9HBW1 653 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 BAG5Q9UL15 447 aa18.84■□□□□ 0.61
HOXC6-202ENST00000394331 UBQLN1Q9UMX0 589 aaKnown RBP18.84■□□□□ 0.61
HOXC6-202ENST00000394331 RRN3P2A6NIE6 340 aa18.83■□□□□ 0.61
HOXC6-202ENST00000394331 C2P06681 752 aa18.83■□□□□ 0.61
HOXC6-202ENST00000394331 IMPDH1P20839 514 aa18.83■□□□□ 0.61
HOXC6-202ENST00000394331 PCBP1Q15365 356 aaKnown RBP eCLIP18.83■□□□□ 0.61
HOXC6-202ENST00000394331 PSMD5Q16401 504 aa18.83■□□□□ 0.61
HOXC6-202ENST00000394331 LRRN4Q8WUT4 740 aa18.83■□□□□ 0.61
HOXC6-202ENST00000394331 CXCL16Q9H2A7 254 aa18.83■□□□□ 0.61
HOXC6-202ENST00000394331 DPEP3Q9H4B8 488 aa18.83■□□□□ 0.61
HOXC6-202ENST00000394331 TIMM44O43615 452 aa18.83■□□□□ 0.6
HOXC6-202ENST00000394331 DDHD2O94830 711 aa18.83■□□□□ 0.6
HOXC6-202ENST00000394331 KCNK2O95069 426 aa18.83■□□□□ 0.6
HOXC6-202ENST00000394331 ARL4AP40617 200 aa18.83■□□□□ 0.6
HOXC6-202ENST00000394331 CLK3P49761 638 aaKnown RBP18.83■□□□□ 0.6
HOXC6-202ENST00000394331 IRF9Q00978 393 aa18.83■□□□□ 0.6
HOXC6-202ENST00000394331 POLD3Q15054 466 aaPredicted RBP18.83■□□□□ 0.6
HOXC6-202ENST00000394331 GRAMD2AQ8IUY3 354 aa18.83■□□□□ 0.6
HOXC6-202ENST00000394331 TBC1D21Q8IYX1 336 aa18.83■□□□□ 0.6
HOXC6-202ENST00000394331 SIX5Q8N196 739 aa18.83■□□□□ 0.6
HOXC6-202ENST00000394331 C18orf25Q96B23 403 aaPredicted RBP18.83■□□□□ 0.6
HOXC6-202ENST00000394331 KCTD15Q96SI1 283 aaPredicted RBP18.83■□□□□ 0.6
HOXC6-202ENST00000394331 KATNBL1Q9H079 304 aa18.83■□□□□ 0.6
HOXC6-202ENST00000394331 RCOR3Q9P2K3 495 aaPredicted RBP18.83■□□□□ 0.6
HOXC6-202ENST00000394331 GINS2Q9Y248 185 aa18.83■□□□□ 0.6
HOXC6-202ENST00000394331 MAGEB16A2A368 324 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 H0Y858 1186 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 MAN1A2O60476 641 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 CD4P01730 458 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 FYNP06241 537 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 SBK3P0C264 359 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 UMPSP11172 480 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 LCP1P13796 627 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 GFAPP14136 432 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 PRKACBP22694 351 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 ADORA2BP29275 332 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 CSE1LP55060 971 aaKnown RBP18.82■□□□□ 0.6
HOXC6-202ENST00000394331 KRR1Q13601 381 aaKnown RBP18.82■□□□□ 0.6
HOXC6-202ENST00000394331 AGKQ53H12 422 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 PAGE2BQ5JRK9 111 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 THAP5Q7Z6K1 395 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 LGI2Q8N0V4 545 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 ESX1Q8N693 406 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 CLEC4CQ8WTT0 213 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 STYXQ8WUJ0 223 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 HTR3CQ8WXA8 447 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 MUS81Q96NY9 551 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 ING2Q9H160 280 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 TLR9Q9NR96 1032 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 DTLQ9NZJ0 730 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 PLXNA1Q9UIW2 1896 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 TAF4O00268 1085 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 HOXD8P13378 290 aaPredicted RBP18.82■□□□□ 0.6
HOXC6-202ENST00000394331 IL12AP29459 219 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 ATXN1P54253 815 aaKnown RBP18.82■□□□□ 0.6
HOXC6-202ENST00000394331 NAGLUP54802 743 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 TOP3AQ13472 1001 aaPredicted RBP18.82■□□□□ 0.6
HOXC6-202ENST00000394331 CDK10Q15131 360 aa18.82■□□□□ 0.6
HOXC6-202ENST00000394331 FBXO47Q5MNV8 452 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms