RNA–Protein interactions for RNA: ENST00000393965.7

CCDC142-202, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC142, Length 3,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-202ENST00000393965 CLVS1Q8IUQ0 354 aaPredicted RBP13.7□□□□□ -0.22
CCDC142-202ENST00000393965 FUBP3Q96I24 572 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCDC142-202ENST00000393965 PRICKLE1Q96MT3 831 aaPredicted RBP13.7□□□□□ -0.22
CCDC142-202ENST00000393965 NSUN5Q96P11 429 aaKnown RBP13.7□□□□□ -0.22
CCDC142-202ENST00000393965 SLC29A1Q99808 456 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 SPON2Q9BUD6 331 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 TRIM62Q9BVG3 475 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 ARNT2Q9HBZ2 717 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 NCKIPSDQ9NZQ3 722 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 SORCS3Q9UPU3 1222 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 CCDC162PA2VCL2 907 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 TFAP2AP05549 437 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 PCNAP12004 261 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 NCK1P16333 377 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 SLC7A2P52569 658 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 MTTPP55157 894 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 ECT2LQ008S8 904 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 IL1RL1Q01638 556 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 C16orf89Q6UX73 402 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 ZBTB49Q6ZSB9 765 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 DENND1CQ8IV53 801 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 ATP6V0D2Q8N8Y2 350 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 CCDC97Q96F63 343 aaPredicted RBP13.7□□□□□ -0.22
CCDC142-202ENST00000393965 C3orf30Q96M34 536 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 VN1R3Q9BXE9 311 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 FAM192AQ9GZU8 254 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 FAM96AQ9H5X1 160 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 EPS15L1Q9UBC2 864 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 UBA6A0AVT1 1052 aaPredicted RBP13.7□□□□□ -0.22
CCDC142-202ENST00000393965 FAM92AA1XBS5 289 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 TMEM189-UBE2V1I3L0A0 370 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 ALDH1A1P00352 501 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 IGLV3-27P01718 113 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 HOXD9P28356 352 aaPredicted RBP13.7□□□□□ -0.22
CCDC142-202ENST00000393965 FOXA1P55317 472 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 PSME3P61289 254 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 MYBPC1Q00872 1141 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 NRG1Q02297 640 aaPredicted RBP13.7□□□□□ -0.22
CCDC142-202ENST00000393965 PRKAA1Q13131 559 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 FASTKQ14296 549 aaKnown RBP13.7□□□□□ -0.22
CCDC142-202ENST00000393965 UGP2Q16851 508 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 LDLRAP1Q5SW96 308 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 LINGO4Q6UY18 593 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 LPCAT2Q7L5N7 544 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 DEFB128Q7Z7B8 93 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 TEX26Q8N6G2 289 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 KCNA7Q96RP8 456 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 POLR3BQ9NW08 1133 aaPredicted RBP13.7□□□□□ -0.22
CCDC142-202ENST00000393965 NSMCE4AQ9NXX6 385 aa13.7□□□□□ -0.22
CCDC142-202ENST00000393965 XIRP2A4UGR9 3374 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 DOCK6Q96HP0 2047 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.69□□□□□ -0.22
CCDC142-202ENST00000393965 TBKBP1A7MCY6 615 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 C11orf91Q3C1V1 193 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 FAM81AQ8TBF8 368 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 DNAJB14Q8TBM8 379 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 MRPL57Q9BQC6 102 aaKnown RBP13.69□□□□□ -0.22
CCDC142-202ENST00000393965 MRM3Q9HC36 420 aaKnown RBP13.69□□□□□ -0.22
CCDC142-202ENST00000393965 TLR8Q9NR97 1041 aaKnown RBP13.69□□□□□ -0.22
CCDC142-202ENST00000393965 TMEM161AQ9NX61 479 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 VWA7Q9Y334 891 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 PCDHB7Q9Y5E2 793 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 LOC285095A0A1B0GVY8 99 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 DRGXA6NNA5 263 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 GNAO1P09471 354 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 PAMP19021 973 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 CCR3P51677 355 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 POU4F1Q01851 419 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 ISCA2Q86U28 154 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 SPPL2CQ8IUH8 684 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 NUDT8Q8WV74 236 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 CNDP1Q96KN2 507 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 UBXN10Q96LJ8 280 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 RNF38Q9H0F5 515 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 PDFQ9HBH1 243 aa13.69□□□□□ -0.22
CCDC142-202ENST00000393965 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC142-202ENST00000393965 SLC38A8A6NNN8 435 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 MAN1A2O60476 641 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 BAIAP3O94812 1187 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 SEC24AO95486 1093 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 GALTP07902 379 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 PPARGP37231 505 aaPredicted RBP13.68□□□□□ -0.22
CCDC142-202ENST00000393965 RPL5P46777 297 aaKnown RBP13.68□□□□□ -0.22
CCDC142-202ENST00000393965 PFKPQ01813 784 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 OR4D1Q15615 310 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 VPS26BQ4G0F5 336 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 UGT2A3Q6UWM9 527 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 HERC6Q8IVU3 1022 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 ARHGAP18Q8N392 663 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 SPPL2BQ8TCT7 592 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 TADA1Q96BN2 335 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 SLC30A3Q99726 388 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 BPIFA1Q9NP55 256 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 FAM50BQ9Y247 325 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 AP4S1Q9Y587 144 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 PCDHGC4Q9Y5F7 938 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 TCAF2A6NFQ2 919 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 ALDH2P05091 517 aa13.68□□□□□ -0.22
CCDC142-202ENST00000393965 MTHFD1P11586 935 aaKnown RBP13.68□□□□□ -0.22
CCDC142-202ENST00000393965 CUZD1Q86UP6 607 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms