RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 KLHDC10Q6PID8 442 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 ANGPTL8Q6UXH0 198 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 CYS1Q717R9 158 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 MIER2Q8N344 545 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 CDYL2Q8N8U2 506 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 TXNDC5Q8NBS9 432 aaKnown RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 METTL6Q8TCB7 284 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 VPS50Q96JG6 964 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 PCDHAC1Q9H158 963 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 TIMMDC1Q9NPL8 285 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 RIC8BQ9NVN3 520 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 LSM7Q9UK45 103 aaKnown RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 COQ6Q9Y2Z9 468 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 Q9Y3F1 56 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 AP4S1Q9Y587 144 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 TRIP11Q15643 1979 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 TMEM247A6NEH6 219 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 MOXD2PA6NHM9 499 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 MATN2O00339 956 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 SYNCRIPO60506 623 aaKnown RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 CAPN15O75808 1086 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 FGF1P05230 155 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 TYMPP19971 482 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 S100A1P23297 94 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 PSMA4P25789 261 aaKnown RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 KPNA1P52294 538 aaPredicted RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 NADK2Q4G0N4 442 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 TPGS1Q6ZTW0 290 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.53□□□□□ -0.72
CALD1-203ENST00000393118 OR9I1Q8NGQ6 314 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 SLC39A3Q9BRY0 314 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 TMEM79Q9BSE2 394 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 RSL24D1Q9UHA3 163 aaKnown RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 PRPF19Q9UMS4 504 aaKnown RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 DMTF1Q9Y222 760 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 ARIH1Q9Y4X5 557 aaPredicted RBP10.53□□□□□ -0.72
CALD1-203ENST00000393118 USP3Q9Y6I4 520 aa10.53□□□□□ -0.72
CALD1-203ENST00000393118 RNASEH1O60930 286 aaKnown RBP10.52□□□□□ -0.73
CALD1-203ENST00000393118 HDCP19113 662 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 HLA-DPA1P20036 260 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 HOXD12P35452 270 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 CAPRIN1Q14444 709 aaKnown RBP10.52□□□□□ -0.73
CALD1-203ENST00000393118 SQLEQ14534 574 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 CARTPTQ16568 116 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 SIRPB2Q5JXA9 342 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 RASAL3Q86YV0 1011 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 ACTRT2Q8TDY3 377 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 PTCD2Q8WV60 388 aaKnown RBP10.52□□□□□ -0.73
CALD1-203ENST00000393118 SORT1Q99523 831 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 THUMPD3Q9BV44 507 aaKnown RBP10.52□□□□□ -0.73
CALD1-203ENST00000393118 HMX1Q9NP08 348 aaPredicted RBP10.52□□□□□ -0.73
CALD1-203ENST00000393118 GKN1Q9NS71 199 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 AGO1Q9UL18 857 aaKnown RBP10.52□□□□□ -0.73
CALD1-203ENST00000393118 TLR6Q9Y2C9 796 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 COPG1Q9Y678 874 aaKnown RBP10.52□□□□□ -0.73
CALD1-203ENST00000393118 TLL2Q9Y6L7 1015 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 A0A088AWK7 358 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 CCDC162PA2VCL2 907 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 A8MT66 165 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 AZIN1O14977 448 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 CCNT2O60583 730 aaKnown RBP10.52□□□□□ -0.73
CALD1-203ENST00000393118 SPATA31D3P0C874 917 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 HALP42357 657 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 ACLYP53396 1101 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 ARHGEF6Q15052 776 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 ZNF789Q5FWF6 425 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 MS4A13Q5J8X5 152 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 SAMD4BQ5PRF9 694 aaKnown RBP10.52□□□□□ -0.73
CALD1-203ENST00000393118 TMEM214Q6NUQ4 689 aaKnown RBP10.52□□□□□ -0.73
CALD1-203ENST00000393118 ZFP1Q6P2D0 407 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 PAOXQ6QHF9 649 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 KIAA0408Q6ZU52 694 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 SPATA31D4Q6ZUB0 917 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 GPSM1Q86YR5 675 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 CLYBLQ8N0X4 340 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 HPS1Q92902 700 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 MRGPRX2Q96LB1 330 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 SPAG4Q9NPE6 437 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 GIMAP2Q9UG22 337 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 PSMD13Q9UNM6 376 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 VPS9D1Q9Y2B5 631 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 ZFP37Q9Y6Q3 630 aaPredicted RBP10.52□□□□□ -0.73
CALD1-203ENST00000393118 TRIM38O00635 465 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 KRT8P05787 483 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 IL2P60568 153 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 DLG1Q12959 904 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 VPS26BQ4G0F5 336 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 EGFLAMQ63HQ2 1017 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 FUT10Q6P4F1 479 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 TTC33Q6PID6 262 aaPredicted RBP10.52□□□□□ -0.73
CALD1-203ENST00000393118 GPR21Q99679 349 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 ABCG8Q9H221 673 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 ATAD3AQ9NVI7 634 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 STK39Q9UEW8 545 aa10.52□□□□□ -0.73
CALD1-203ENST00000393118 GPC6Q9Y625 555 aaPredicted RBP10.52□□□□□ -0.73
CALD1-203ENST00000393118 TRIM64CA6NLI5 447 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 NRP2O60462 931 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 FAM163BP0C2L3 166 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 LBPP18428 481 aa10.51□□□□□ -0.73
CALD1-203ENST00000393118 MC4RP32245 332 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms