RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 AP3S1Q92572 193 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 KCTD15Q96SI1 283 aaPredicted RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 TSPAN18Q96SJ8 248 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 PRDM8Q9NQV8 689 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 GALNT8Q9NY28 637 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 TMA7Q9Y2S6 64 aaKnown RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 GIT1Q9Y2X7 761 aa13.11□□□□□ -0.31
LCA5-202ENST00000392959 ARHGEF28Q8N1W1 1705 aaKnown RBP13.11□□□□□ -0.31
LCA5-202ENST00000392959 PRDX6P30041 224 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 CAPGP40121 348 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 POLR2JP52435 117 aaKnown RBP13.1□□□□□ -0.31
LCA5-202ENST00000392959 SIM2Q14190 667 aaPredicted RBP13.1□□□□□ -0.31
LCA5-202ENST00000392959 VPS26BQ4G0F5 336 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 FAM151BQ6UXP7 276 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 ZYG11AQ6WRX3 759 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 C16orf62Q7Z3J2 963 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 ANKS1BQ7Z6G8 1248 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 C1orf127Q8N9H9 656 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 NAT14Q8WUY8 206 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 FNDC11Q9BVV2 318 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.1□□□□□ -0.31
LCA5-202ENST00000392959 RHBGQ9H310 441 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 MUC13Q9H3R2 512 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 TRMT13Q9NUP7 481 aaKnown RBP13.1□□□□□ -0.31
LCA5-202ENST00000392959 DMAC2Q9NW81 257 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 FBXO10Q9UK96 956 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 SLC27A5Q9Y2P5 690 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 PTPN9P43378 593 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 BRCC3P46736 316 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 GPR158Q5T848 1215 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 ZNF554Q86TJ5 538 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 RASAL3Q86YV0 1011 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 BANPQ8N9N5 519 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 C1QTNF7Q9BXJ2 289 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 TIMM22Q9Y584 194 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 GCATO75600 419 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 ERAL1O75616 437 aaKnown RBP13.1□□□□□ -0.31
LCA5-202ENST00000392959 RPP40O75818 363 aaKnown RBP13.1□□□□□ -0.31
LCA5-202ENST00000392959 CHRNB2P17787 502 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 CYP1B1Q16678 543 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 GPAT3Q53EU6 434 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 PRAMEF19Q5SWL8 479 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 PTCHD4Q6ZW05 846 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 UTS2BQ765I0 119 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 RALGPS2Q86X27 583 aaPredicted RBP13.1□□□□□ -0.31
LCA5-202ENST00000392959 OR4K2Q8NGD2 314 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 EEF1AKMT1Q8WVE0 214 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 TWIST2Q8WVJ9 160 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 PPP1R16AQ96I34 528 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 TEFMQ96QE5 360 aaKnown RBP13.1□□□□□ -0.31
LCA5-202ENST00000392959 ARHGEF4Q9NR80 690 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 MRPL17Q9NRX2 175 aaKnown RBP13.1□□□□□ -0.31
LCA5-202ENST00000392959 FAM105AQ9NUU6 356 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 PPLO60437 1756 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 SMIM28A0A1B0GU29 152 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 FAM149AA5PLN7 773 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 MTHFRP42898 656 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 CTSKP43235 329 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 GPR1P46091 355 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 LSM12Q3MHD2 195 aaKnown RBP13.1□□□□□ -0.31
LCA5-202ENST00000392959 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.1□□□□□ -0.31
LCA5-202ENST00000392959 ZNF572Q7Z3I7 529 aaPredicted RBP13.1□□□□□ -0.31
LCA5-202ENST00000392959 LRRC17Q8N6Y2 441 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 ZNF781Q8N8C0 355 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 CLHC1Q8NHS4 586 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 CLP1Q92989 425 aaKnown RBP13.1□□□□□ -0.31
LCA5-202ENST00000392959 WASF2Q9Y6W5 498 aa13.1□□□□□ -0.31
LCA5-202ENST00000392959 AP3D1O14617 1153 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 UGT2B11O75310 529 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 FOXN2P32314 431 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 KIR3DL1P43629 444 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 RPS9P46781 194 aaKnown RBP13.09□□□□□ -0.31
LCA5-202ENST00000392959 INTS6LQ5JSJ4 861 aaKnown RBP13.09□□□□□ -0.31
LCA5-202ENST00000392959 FSTL4Q6MZW2 842 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 ZDHHC24Q6UX98 284 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 CAMKK1Q8N5S9 505 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 APOLD1Q96LR9 279 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 ZNF607Q96SK3 696 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 BRD9Q9H8M2 597 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 RAB23Q9ULC3 237 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 GPIP06744 558 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 ENO2P09104 434 aaPredicted RBP13.09□□□□□ -0.31
LCA5-202ENST00000392959 MAPKAPK2P49137 400 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 LIPEQ05469 1076 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 ASTE1Q2TB18 679 aaPredicted RBP13.09□□□□□ -0.31
LCA5-202ENST00000392959 RHBDF2Q6PJF5 856 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 NANOGNBQ7Z5D8 188 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 GBA3Q9H227 469 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 RASSF1Q9NS23 344 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 POMPQ9Y244 141 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 N6AMT1Q9Y5N5 214 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 TMEM131LA2VDJ0 1609 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 UBE2QL1A1L167 161 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 TBC1D3BA6NDS4 549 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 SLC9A3R1O14745 358 aaPredicted RBP13.09□□□□□ -0.31
LCA5-202ENST00000392959 MSI1O43347 362 aaKnown RBP13.09□□□□□ -0.31
LCA5-202ENST00000392959 THRBP10828 461 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 MAPK9P45984 424 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 RHAGQ02094 409 aa13.09□□□□□ -0.31
LCA5-202ENST00000392959 DGKZQ13574 1117 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms