RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 UGT1A1P22309 533 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 UGT1A4P22310 534 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 CORO1AP31146 461 aaKnown RBP19■□□□□ 0.63
CCDC50-202ENST00000392456 UGT1A3P35503 534 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 UGT1A5P35504 534 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 CCR2P41597 374 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 ARL4CP56559 192 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 SELENBP1Q13228 472 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 SEMA5AQ13591 1074 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 OGFRL1Q5TC84 451 aaPredicted RBP19■□□□□ 0.63
CCDC50-202ENST00000392456 LGI2Q8N0V4 545 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 RAB3IL1Q8TBN0 382 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 ADAMTS19Q8TE59 1207 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 MAML1Q92585 1016 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 ZNF75CPQ92670 426 aaPredicted RBP19■□□□□ 0.63
CCDC50-202ENST00000392456 CDK5RAP1Q96SZ6 601 aaKnown RBP19■□□□□ 0.63
CCDC50-202ENST00000392456 UGT1A7Q9HAW7 530 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 UGT1A10Q9HAW8 530 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 UGT1A8Q9HAW9 530 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 KLHL8Q9P2G9 620 aaPredicted RBP19■□□□□ 0.63
CCDC50-202ENST00000392456 TBC1D14Q9P2M4 693 aa19■□□□□ 0.63
CCDC50-202ENST00000392456 PPARGC1AQ9UBK2 798 aaKnown RBP19■□□□□ 0.63
CCDC50-202ENST00000392456 E7ESA3 106 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 B3GALNT1O75752 331 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 GLUD1P00367 558 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 LRG1P02750 347 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 RHOQP17081 205 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 JAK1P23458 1154 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 SSTR1P30872 391 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 HTR7P34969 479 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 MAGEA6P43360 314 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 RPS24P62847 133 aaKnown RBP18.99■□□□□ 0.63
CCDC50-202ENST00000392456 IRX4P78413 519 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 GK3PQ14409 553 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 STAT4Q14765 748 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 GRAMD1BQ3KR37 738 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 FBXO36Q8NEA4 188 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 OR52K2Q8NGK3 314 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 SDCCAG3Q96C92 435 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 TMA16Q96EY4 203 aaKnown RBP18.99■□□□□ 0.63
CCDC50-202ENST00000392456 ZNF641Q96N77 438 aaPredicted RBP18.99■□□□□ 0.63
CCDC50-202ENST00000392456 HAUS8Q9BT25 410 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 EMILIN2Q9BXX0 1053 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 MTIF3Q9H2K0 278 aaKnown RBP18.99■□□□□ 0.63
CCDC50-202ENST00000392456 TMEM248Q9NWD8 314 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 AGO1Q9UL18 857 aaKnown RBP18.99■□□□□ 0.63
CCDC50-202ENST00000392456 B3GNT3Q9Y2A9 372 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 YBX2Q9Y2T7 364 aaKnown RBP18.99■□□□□ 0.63
CCDC50-202ENST00000392456 PRRC2BQ5JSZ5 2229 aaKnown RBP18.99■□□□□ 0.63
CCDC50-202ENST00000392456 A0A1W2PRU2 124 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 WASH4PA8MWX3 477 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 CRTAMO95727 393 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 MBL2P11226 248 aaPredicted RBP18.99■□□□□ 0.63
CCDC50-202ENST00000392456 HARS2P49590 506 aaKnown RBP18.99■□□□□ 0.63
CCDC50-202ENST00000392456 NIPAL4Q0D2K0 466 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 TEX44Q53QW1 395 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 PDIK1LQ8N165 341 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 ANGPTL6Q8NI99 470 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 HMCESQ96FZ2 354 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 DCUN1D1Q96GG9 259 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 CCDC77Q9BR77 488 aa18.99■□□□□ 0.63
CCDC50-202ENST00000392456 NYNRINQ9P2P1 1898 aaKnown RBP18.99■□□□□ 0.63
CCDC50-202ENST00000392456 EPCAMP16422 314 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 ELK3P41970 407 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 ZBTB16Q05516 673 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 CDK18Q07002 472 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 RALGDSQ12967 914 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 OTOP3Q7RTS5 596 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 RBM23Q86U06 439 aaKnown RBP18.98■□□□□ 0.63
CCDC50-202ENST00000392456 GPR180Q86V85 440 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 MPP5Q8N3R9 675 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 ATPAF2Q8N5M1 289 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 LINC00469Q8N7U9 141 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 CNBD2Q96M20 576 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 ARMC1Q9NVT9 282 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 UBP1Q9NZI7 540 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 MAFFQ9ULX9 164 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 A0A0G2JND7 137 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 C5orf67F2Z3F1 127 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 H3BNX3 289 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 J3KR12 359 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 PSMD11O00231 422 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 PRKCAP17252 672 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 HDCP19113 662 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 ATP6V0D1P61421 351 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 TMED2Q15363 201 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 TRIM16LQ309B1 348 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 DNAL1Q4LDG9 190 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 CEP78Q5JTW2 689 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 UMODL1-AS1Q8N2C9 162 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 Q8N9G6 341 aaPredicted RBP18.98■□□□□ 0.63
CCDC50-202ENST00000392456 VPS37AQ8NEZ2 397 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 TSGA13Q96PP4 275 aa18.98■□□□□ 0.63
CCDC50-202ENST00000392456 UXTQ9UBK9 157 aaPredicted RBP18.98■□□□□ 0.63
CCDC50-202ENST00000392456 ZFP37Q9Y6Q3 630 aaPredicted RBP18.98■□□□□ 0.63
CCDC50-202ENST00000392456 GREM1O60565 184 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 TSPAN3O60637 253 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 USP12O75317 370 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 P2RX3P56373 397 aa18.97■□□□□ 0.63
CCDC50-202ENST00000392456 SMAD3P84022 425 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms