RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 TMEM9BQ9NQ34 198 aa6.75□□□□□ -1.33
UBBP1-201ENST00000392399 MBNL1Q9NR56 388 aaKnown RBP6.75□□□□□ -1.33
UBBP1-201ENST00000392399 GPR27Q9NS67 375 aa6.75□□□□□ -1.33
UBBP1-201ENST00000392399 DNAAF2Q9NVR5 837 aaKnown RBP6.75□□□□□ -1.33
UBBP1-201ENST00000392399 PLA2G2EQ9NZK7 142 aa6.75□□□□□ -1.33
UBBP1-201ENST00000392399 IL17CQ9P0M4 197 aa6.75□□□□□ -1.33
UBBP1-201ENST00000392399 CDC23Q9UJX2 597 aa6.75□□□□□ -1.33
UBBP1-201ENST00000392399 SHOC2Q9UQ13 582 aa6.75□□□□□ -1.33
UBBP1-201ENST00000392399 COQ6Q9Y2Z9 468 aa6.75□□□□□ -1.33
UBBP1-201ENST00000392399 NEU2Q9Y3R4 380 aa6.75□□□□□ -1.33
UBBP1-201ENST00000392399 PKP3Q9Y446 797 aa6.75□□□□□ -1.33
UBBP1-201ENST00000392399 ZNF711Q9Y462 761 aa6.75□□□□□ -1.33
UBBP1-201ENST00000392399 SLCO1B1Q9Y6L6 691 aa6.75□□□□□ -1.33
UBBP1-201ENST00000392399 RALGAPA1Q6GYQ0 2036 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 TNRC6BQ9UPQ9 1833 aaKnown RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 F5H423 210 aaPredicted RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 H0Y8X5 98 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 SMAPO00193 183 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 CACNB4O00305 520 aaPredicted RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 CDX4O14627 284 aaPredicted RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 TNFRSF10CO14798 259 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 STX7O15400 261 aaKnown RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 URI1O94763 535 aaPredicted RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 C1SP09871 688 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 PIRTP0C851 137 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 ZSCAN5DPP0CG00 497 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 MLNP12872 115 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 ETS1P14921 441 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 TPSB2P20231 275 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 LPOP22079 712 aaPredicted RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 ADRA1DP25100 572 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 IGFALSP35858 605 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 CHRNA4P43681 627 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 GPR1P46091 355 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 NPY2RP49146 381 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 BLKP51451 505 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 CLDN2P57739 230 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 HNRNPKP61978 463 aaKnown RBP eCLIP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 BASP1P80723 227 aaKnown RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 BNC1Q01954 994 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 CKAP4Q07065 602 aaKnown RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 GPS1Q13098 491 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 MSLNQ13421 630 aaPredicted RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 PDE1CQ14123 709 aaPredicted RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 NFATC4Q14934 902 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 PTPRRQ15256 657 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 IRF4Q15306 451 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 PPP1R7Q15435 360 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 TPSAB1Q15661 275 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 WHAMMP3Q1A5X7 153 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 HLA-BQ31612 363 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 HENMT1Q5T8I9 393 aaKnown RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 TCEAL6Q6IPX3 200 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 ADAMTSL4Q6UY14 1074 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 PPP1R21Q6ZMI0 780 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 MACC1Q6ZN28 852 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 DBX2Q6ZNG2 339 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 NLRP9Q7RTR0 991 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 LYSMD3Q7Z3D4 306 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 ZNF572Q7Z3I7 529 aaPredicted RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 PTAR1Q7Z6K3 402 aaPredicted RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 SDR16C5Q8N3Y7 309 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 TTC30BQ8N4P2 665 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 MINDY1Q8N5J2 469 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 DNAAF3Q8N9W5 541 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 GLIS1Q8NBF1 620 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 SPATA4Q8NEY3 305 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 OR13H1Q8NG92 308 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 NETO1Q8TDF5 533 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 BLOC1S5Q8TDH9 187 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 STYXQ8WUJ0 223 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 BTN2A2Q8WVV5 523 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 PEX13Q92968 403 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 TCEAL3Q969E4 200 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 EID2BQ96D98 161 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 TBATAQ96M53 351 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 MYOCQ99972 504 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 EDEM2Q9BV94 578 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 GTPBP2Q9BX10 602 aaKnown RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 TEX101Q9BY14 249 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 ABCG8Q9H221 673 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 SMOC1Q9H4F8 434 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 GAREM1Q9H706 876 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 WDR26Q9H7D7 661 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 CASS4Q9NQ75 786 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 PHPT1Q9NRX4 125 aaPredicted RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 SMARCAL1Q9NZC9 954 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 APPL1Q9UKG1 709 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 RIMKLBQ9ULI2 386 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 PCDHGB2Q9Y5G2 931 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 SPO11Q9Y5K1 396 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 SNX11Q9Y5W9 270 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.74□□□□□ -1.33
UBBP1-201ENST00000392399 CABIN1Q9Y6J0 2220 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 DMXL1Q9Y485 3027 aa6.74□□□□□ -1.33
UBBP1-201ENST00000392399 A0A1B0GTQ1 180 aa6.73□□□□□ -1.33
UBBP1-201ENST00000392399 MAGEB16A2A368 324 aa6.73□□□□□ -1.33
UBBP1-201ENST00000392399 HEATR9A2RTY3 570 aa6.73□□□□□ -1.33
UBBP1-201ENST00000392399 FAM187AA6NFU0 413 aa6.73□□□□□ -1.33
UBBP1-201ENST00000392399 GPR89AB7ZAQ6 455 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms