RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PRR23BQ6ZRT6 265 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 TMEM86AQ8N2M4 240 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 OR5B17Q8NGF7 314 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 CLCA2Q9UQC9 943 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 TNFSF13BQ9Y275 285 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 TTLL13PA6NNM8 815 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 H3BSA7 217 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 PMF1Q6P1K2 205 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 UTS2BQ765I0 119 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 ITCHQ96J02 903 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 SIX2Q9NPC8 291 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.67■□□□□ 0.74
SHANK1-203ENST00000391813 PCDHGA10Q9Y5H3 936 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 STAU1O95793 577 aaKnown RBP19.67■□□□□ 0.74
SHANK1-203ENST00000391813 MBL2P11226 248 aaPredicted RBP19.67■□□□□ 0.74
SHANK1-203ENST00000391813 EPB42P16452 691 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 ERCC2P18074 760 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 MAGP20916 626 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 AKAP5P24588 427 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 MPP1Q00013 466 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 CREMQ03060 361 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 PRKCQQ04759 706 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 LIPEQ05469 1076 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 PTPN20Q4JDL3 420 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 ASB9Q96DX5 294 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 ALG2Q9H553 416 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 FAM149AA5PLN7 773 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 AIREO43918 545 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 ANXA5P08758 320 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 LINC00032P0C843 101 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 CRYBB1P53674 252 aaPredicted RBP19.67■□□□□ 0.74
SHANK1-203ENST00000391813 AIF1P55008 147 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 RPL38P63173 70 aaKnown RBP19.67■□□□□ 0.74
SHANK1-203ENST00000391813 DENND6AQ8IWF6 608 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 FCGR1BQ92637 280 aa19.67■□□□□ 0.74
SHANK1-203ENST00000391813 TSPAN8P19075 237 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 PSMD4P55036 377 aaKnown RBP19.66■□□□□ 0.74
SHANK1-203ENST00000391813 TBX4P57082 545 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 CYP4F2P78329 520 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 CYP4F3Q08477 520 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 SHROOM1Q2M3G4 852 aaPredicted RBP19.66■□□□□ 0.74
SHANK1-203ENST00000391813 NCCRP1Q6ZVX7 275 aaPredicted RBP19.66■□□□□ 0.74
SHANK1-203ENST00000391813 ADAM32Q8TC27 787 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 HSPBAP1Q96EW2 488 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 B3GALT6Q96L58 329 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 ZNF558Q96NG5 402 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 TSPAN18Q96SJ8 248 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 AASDHPPTQ9NRN7 309 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 SEMA3DO95025 777 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 PSMA1P25786 263 aaKnown RBP19.66■□□□□ 0.74
SHANK1-203ENST00000391813 CDH13P55290 713 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 PTSQ03393 145 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 ADGRG6Q86SQ4 1221 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 EBF4Q9BQW3 602 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 ULBP1Q9BZM6 244 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 MAGEE1Q9HCI5 957 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.66■□□□□ 0.74
SHANK1-203ENST00000391813 RGPD8O14715 1765 aaPredicted RBP19.66■□□□□ 0.74
SHANK1-203ENST00000391813 ATRNL1Q5VV63 1379 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 KLRC2P26717 231 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 CA9Q16790 459 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 LLGL2Q6P1M3 1020 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 TFAP2DQ7Z6R9 452 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 NELL1Q92832 810 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 NACC2Q96BF6 587 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 MAGEB10Q96LZ2 347 aaPredicted RBP19.66■□□□□ 0.74
SHANK1-203ENST00000391813 PSME2Q9UL46 239 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 SLC45A1Q9Y2W3 748 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 FAM171A1Q5VUB5 890 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 C11orf96Q7Z7L8 435 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 CD99L2Q8TCZ2 262 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 UXTQ9UBK9 157 aaPredicted RBP19.66■□□□□ 0.74
SHANK1-203ENST00000391813 ITM2BQ9Y287 266 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 STON1Q9Y6Q2 735 aa19.66■□□□□ 0.74
SHANK1-203ENST00000391813 PLIN4Q96Q06 1357 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 NPHS1O60500 1241 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 PLOD3O60568 738 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 NOS1APO75052 506 aaPredicted RBP19.65■□□□□ 0.74
SHANK1-203ENST00000391813 ITGB5P18084 799 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 TTPAP49638 278 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 STRADAQ7RTN6 431 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 PTCD2Q8WV60 388 aaKnown RBP19.65■□□□□ 0.74
SHANK1-203ENST00000391813 OR1E1P30953 314 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 MACC1Q6ZN28 852 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 FRMD7Q6ZUT3 714 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 PARP8Q8N3A8 854 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 OR52E6Q96RD3 313 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 EHD1Q9H4M9 534 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 ARMC7Q9H6L4 198 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 DMAC2Q9NW81 257 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 FANCGO15287 622 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 GCATO75600 419 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 MATKP42679 507 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 NEK5Q6P3R8 708 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 OR52K2Q8NGK3 314 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 SNX7Q9UNH6 387 aa19.65■□□□□ 0.74
SHANK1-203ENST00000391813 IRGMA1A4Y4 181 aa19.64■□□□□ 0.74
SHANK1-203ENST00000391813 RCVRNP35243 200 aa19.64■□□□□ 0.74
SHANK1-203ENST00000391813 PPM1AP35813 382 aa19.64■□□□□ 0.74
SHANK1-203ENST00000391813 TMEM110Q86TL2 294 aa19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 334 ms