RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 LYSMD3Q7Z3D4 306 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 FMR1NBQ8N0W7 255 aaPredicted RBP9.6□□□□□ -0.87
IFT88-203ENST00000389373 TSEN2Q8NCE0 465 aaKnown RBP9.6□□□□□ -0.87
IFT88-203ENST00000389373 GPT2Q8TD30 523 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 FNIP1Q8TF40 1166 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 COQ10AQ96MF6 247 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 OR6C1Q96RD1 312 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 STN1Q9H668 368 aaKnown RBP9.6□□□□□ -0.87
IFT88-203ENST00000389373 ACSS2Q9NR19 701 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 LNPEPQ9UIQ6 1025 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 HOOK1Q9UJC3 728 aaKnown RBP9.6□□□□□ -0.87
IFT88-203ENST00000389373 MAN1B1Q9UKM7 699 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 NEU3Q9UQ49 428 aa9.6□□□□□ -0.87
IFT88-203ENST00000389373 ARHGEF17Q96PE2 2063 aaPredicted RBP9.6□□□□□ -0.87
IFT88-203ENST00000389373 TTC24A2A3L6 582 aaPredicted RBP9.59□□□□□ -0.87
IFT88-203ENST00000389373 GOLGA6L4A6NEF3 574 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 WIPF3A6NGB9 483 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 ARGFXA6NJG6 315 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 PPP1R3GB7ZBB8 358 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 BIN1O00499 593 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 KRT86O43790 486 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 SNX2O60749 519 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 SORBS2O94875 1100 aaKnown RBP9.59□□□□□ -0.87
IFT88-203ENST00000389373 ASMTLO95671 621 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 FGFR1OPO95684 399 aaKnown RBP9.59□□□□□ -0.87
IFT88-203ENST00000389373 EML2O95834 649 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 IVLP07476 585 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 PON1P27169 355 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 CDH5P33151 784 aaPredicted RBP9.59□□□□□ -0.87
IFT88-203ENST00000389373 ETV3P41162 512 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 GPR1P46091 355 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 FASLGP48023 281 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 SCNN1BP51168 640 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 NR6A1Q15406 480 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 CNGA3Q16281 694 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 PARP15Q460N3 678 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 NAA35Q5VZE5 725 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 CPZQ66K79 652 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 SLFN11Q7Z7L1 901 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 TRIM74Q86UV6 250 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 APLFQ8IW19 511 aaPredicted RBP9.59□□□□□ -0.87
IFT88-203ENST00000389373 TTC13Q8NBP0 860 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 JOSD2Q8TAC2 188 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 FAM172AQ8WUF8 416 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 CELF6Q96J87 481 aaKnown RBP9.59□□□□□ -0.87
IFT88-203ENST00000389373 C5orf34Q96MH7 638 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 CINPQ9BW66 212 aaPredicted RBP9.59□□□□□ -0.87
IFT88-203ENST00000389373 TBC1D10AQ9BXI6 508 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 CATSPERBQ9H7T0 1116 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 CNOT8Q9UFF9 292 aaKnown RBP9.59□□□□□ -0.87
IFT88-203ENST00000389373 ZNHIT2Q9UHR6 403 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 CD84Q9UIB8 345 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 PADI1Q9ULC6 663 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 SLC5A6Q9Y289 635 aa9.59□□□□□ -0.87
IFT88-203ENST00000389373 TNRC6AQ8NDV7 1962 aaKnown RBP9.59□□□□□ -0.87
IFT88-203ENST00000389373 SPTBN1Q01082 2364 aaKnown RBP9.58□□□□□ -0.88
IFT88-203ENST00000389373 LRCH4O75427 683 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 MMEP08473 750 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 CYP11B1P15538 503 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 GRNP28799 593 aaKnown RBP9.58□□□□□ -0.88
IFT88-203ENST00000389373 VIPR1P32241 457 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 PAPOLAP51003 745 aaKnown RBP9.58□□□□□ -0.88
IFT88-203ENST00000389373 GFERP55789 205 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 RPS18P62269 152 aaKnown RBP9.58□□□□□ -0.88
IFT88-203ENST00000389373 SH3BP2P78314 561 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 PAK1Q13153 545 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.58□□□□□ -0.88
IFT88-203ENST00000389373 JMJD6Q6NYC1 403 aaPredicted RBP9.58□□□□□ -0.88
IFT88-203ENST00000389373 Q6ZVL8 140 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 CHST15Q7LFX5 561 aaPredicted RBP9.58□□□□□ -0.88
IFT88-203ENST00000389373 HSD11B1LQ7Z5J1 315 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 SLC9B2Q86UD5 537 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 GALNT13Q8IUC8 556 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 PLXDC1Q8IUK5 500 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 FAM71AQ8IYT1 594 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 SFRP1Q8N474 314 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 PIP4P2Q8N4L2 257 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 CT55Q8WUE5 264 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 SNX21Q969T3 373 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 SH3KBP1Q96B97 665 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 ECHDC3Q96DC8 303 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 C19orf60Q96EN9 201 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 RUFY1Q96T51 708 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 ACTL8Q9H568 366 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 SIX2Q9NPC8 291 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 SLC17A4Q9Y2C5 497 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 PRKAB1Q9Y478 270 aa9.58□□□□□ -0.88
IFT88-203ENST00000389373 A0A0U1RQS6 177 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 ARHGAP42A6NI28 874 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 A6NL46 340 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 DPM1O60762 260 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 PRAMEF11O60813 436 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 SPAG6O75602 509 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 RASSF9O75901 435 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 HEXIM1O94992 359 aaKnown RBP9.57□□□□□ -0.88
IFT88-203ENST00000389373 CPP00450 1065 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 CYP2A6P11509 494 aaPredicted RBP9.57□□□□□ -0.88
IFT88-203ENST00000389373 PRF1P14222 555 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 TYRP1P17643 537 aa9.57□□□□□ -0.88
IFT88-203ENST00000389373 AMD1P17707 334 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms