RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 MFSD6Q6ZSS7 791 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 SH2D5Q6ZV89 423 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 SV2BQ7L1I2 683 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 G2E3Q7L622 706 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 KDELC2Q7Z4H8 507 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 PROSER2Q86WR7 435 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 EGFL6Q8IUX8 553 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CCDC36Q8IYA8 594 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TTC5Q8N0Z6 440 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CFAP52Q8N1V2 620 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 C6orf223Q8N319 242 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 LRTM2Q8N967 370 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 KCNH5Q8NCM2 988 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 HIPK4Q8NE63 616 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 PCDH19Q8TAB3 1148 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 BICD2Q8TD16 824 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 USP7Q93009 1102 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 R3HDM4Q96D70 268 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 ARHGEF26Q96DR7 871 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TXNDC15Q96J42 360 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CLMNQ96JQ2 1002 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 NECTIN4Q96NY8 510 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 ODF3Q96PU9 254 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TINF2Q9BSI4 451 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CLEC7AQ9BXN2 247 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TRIM54Q9BYV2 358 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 KLHL25Q9H0H3 589 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 C16orf95Q9H693 158 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 PLEKHA5Q9HAU0 1116 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 PNPLA8Q9NP80 782 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TREX1Q9NSU2 369 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 SIX4Q9UIU6 781 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TTC7AQ9ULT0 858 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 SYNPO2Q9UMS6 1093 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 DUSP12Q9UNI6 340 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 MTF2Q9Y483 593 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 LIPGQ9Y5X9 500 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 USP19O94966 1318 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 MN1Q10571 1320 aaPredicted RBP-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 DENND4AQ7Z401 1863 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 VPS13BQ7Z7G8 4022 aa-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 RPRD2Q5VT52 1461 aaKnown RBP-2.27□□□□□ -2.77
RNU6-1340P-201ENST00000384438 PIKFYVEQ9Y2I7 2098 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 IGKV2D-29A0A075B6S2 120 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TRBV6-6A0A0A6YYG2 114 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CCDC189A1A4V9 331 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 MID1O15344 667 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 SOCS1O15524 211 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TLX2O43763 284 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 FZD6O60353 706 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 MSCO60682 206 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TBX19O60806 448 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 SH3BGRLO75368 114 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 GAGE7O76087 117 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 IGHV4-39P01824 125 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 AMY2AP04746 511 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CD2P06729 351 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 IGFBP1P08833 259 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 GAGE12FP0CL80 117 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 GAGE12GP0CL81 117 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 GAGE12IP0CL82 117 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 P0DMU3 169 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 FAM231AP0DMU4 169 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 FAM231CP0DMU5 169 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 UMPSP11172 480 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 AMY2BP19961 511 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TNFAIP3P21580 790 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 LPOP22079 712 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 SDHAP31040 664 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 FMO4P31512 558 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CRHR1P34998 444 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 GGT5P36269 586 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 GNL1P36915 607 aaPredicted RBP-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 SOX2P48431 317 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 MMP14P50281 582 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 SCNN1BP51168 640 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 EFNA5P52803 228 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 ECT2LQ008S8 904 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 ZNF543Q08ER8 600 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 GAGE1Q13065 139 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 GAGE4Q13068 117 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 GAGE5Q13069 117 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 GAGE6Q13070 117 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 ORC1Q13415 861 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 MLECQ14165 292 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 KIAA0040Q15053 153 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 GRAMD1BQ3KR37 738 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 CCDC14Q49A88 953 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 STXBP5Q5T5C0 1151 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TSPO2Q5TGU0 170 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TRNP1Q6NT89 227 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 MRNIPQ6NTE8 343 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 ZNF529Q6P280 563 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 OTOP1Q7RTM1 612 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 KRT74Q7RTS7 529 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 DCLK2Q8N568 766 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 RNF149Q8NC42 400 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 TBC1D15Q8TC07 691 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 NPRL2Q8WTW4 380 aa-2.28□□□□□ -2.77
RNU6-1340P-201ENST00000384438 HDAC7Q8WUI4 952 aa-2.28□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms