RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 SULT2A1Q06520 285 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 CMPK2Q5EBM0 449 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 PGM2L1Q6PCE3 622 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 C16orf89Q6UX73 402 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 STAG3L4Q8TBR4 150 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 KIAA1191Q96A73 305 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 LENG8Q96PV6 779 aaPredicted RBP23.05■■□□□ 1.28
VPS16-201ENST00000380443 GDF15Q99988 308 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 GSTO2Q9H4Y5 243 aa23.05■■□□□ 1.28
VPS16-201ENST00000380443 TRAV19A0A0A6YYK7 116 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 TGM5O43548 720 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 KCNA5P22460 613 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 SLC25A3Q00325 362 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 PPIGQ13427 754 aaKnown RBP eCLIP23.04■■□□□ 1.281e-6■■■■□ 24.4
VPS16-201ENST00000380443 ARMC12Q5T9G4 340 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 AAGABQ6PD74 315 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 LILRA6Q6PI73 481 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 PIM3Q86V86 326 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 MOCOSQ96EN8 888 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 RSRC1Q96IZ7 334 aaKnown RBP23.04■■□□□ 1.28
VPS16-201ENST00000380443 LRRC3Q9BY71 257 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 CYP4F12Q9HCS2 524 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 KIAA1522Q9P206 1035 aaPredicted RBP23.04■■□□□ 1.28
VPS16-201ENST00000380443 MCM8Q9UJA3 840 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 ANGPTL2Q9UKU9 493 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 PRPF19Q9UMS4 504 aaKnown RBP23.04■■□□□ 1.28
VPS16-201ENST00000380443 LRRC42Q9Y546 428 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 OAS3Q9Y6K5 1087 aaKnown RBP23.04■■□□□ 1.28
VPS16-201ENST00000380443 OBSL1O75147 1896 aa23.04■■□□□ 1.28
VPS16-201ENST00000380443 GOLGA8CPA6NN73 597 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 SYCE1LA8MT33 242 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 SDHDO14521 159 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 NEMP1O14524 444 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 VPS26AO75436 327 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 CNPP09543 421 aaKnown RBP23.03■■□□□ 1.28
VPS16-201ENST00000380443 CUL3Q13618 768 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 CYLC2Q14093 348 aaPredicted RBP23.03■■□□□ 1.28
VPS16-201ENST00000380443 PDCD2Q16342 344 aaPredicted RBP23.03■■□□□ 1.28
VPS16-201ENST00000380443 ACCSLQ4AC99 568 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 NXNQ6DKJ4 435 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 LINGO4Q6UY18 593 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 CHSY3Q70JA7 882 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 RTL10Q7L3V2 364 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 TMC8Q8IU68 726 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 TBRG4Q969Z0 631 aaKnown RBP eCLIP23.03■■□□□ 1.28
VPS16-201ENST00000380443 PTERQ96BW5 349 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 PKP3Q9Y446 797 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 UBA6A0AVT1 1052 aaPredicted RBP23.03■■□□□ 1.28
VPS16-201ENST00000380443 KERAO60938 352 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 ADH1AP07327 375 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 PKMP14618 531 aaKnown RBP23.03■■□□□ 1.28
VPS16-201ENST00000380443 HNRNPLP14866 589 aaKnown RBP eCLIP23.03■■□□□ 1.28
VPS16-201ENST00000380443 ITGAXP20702 1163 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 MC4RP32245 332 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 BMP8BP34820 402 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 ABL2P42684 1182 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 EPHB1P54762 984 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 RCN1Q15293 331 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 C1orf146Q5VVC0 180 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 CERS6Q6ZMG9 384 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 RIPOR1Q6ZS17 1223 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 TMCO2Q7Z6W1 182 aaPredicted RBP23.03■■□□□ 1.28
VPS16-201ENST00000380443 MYLK4Q86YV6 388 aaPredicted RBP23.03■■□□□ 1.28
VPS16-201ENST00000380443 FIBCD1Q8N539 461 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 JADE3Q92613 823 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 PHF21BQ96EK2 531 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 ATOH8Q96SQ7 321 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 ZBTB26Q9HCK0 441 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 TRAF6Q9Y4K3 522 aa23.03■■□□□ 1.28
VPS16-201ENST00000380443 LOC100653049A0A140TA62 436 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 MEI4A8MW99 385 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 H0Y3Z8 333 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 SOCS5O75159 536 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 KRT34O76011 436 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 PGLSO95336 258 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 CKMP06732 381 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 FGF4P08620 206 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 FMO4P31512 558 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 PTGER3P43115 390 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 PTDSS1P48651 473 aaKnown RBP23.02■■□□□ 1.28
VPS16-201ENST00000380443 PLK1P53350 603 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 IRX1P78414 480 aaPredicted RBP23.02■■□□□ 1.28
VPS16-201ENST00000380443 UNC50Q53HI1 259 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 UGT3A1Q6NUS8 523 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 CHRDL2Q6WN34 429 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 GAREM2Q75VX8 874 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 FIBINQ8TAL6 211 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 DDI1Q8WTU0 396 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 PANX3Q96QZ0 392 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 SERPINI1Q99574 410 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 SHCBP1LQ9BZQ2 653 aa23.02■■□□□ 1.28
VPS16-201ENST00000380443 POLR3BQ9NW08 1133 aaPredicted RBP23.02■■□□□ 1.28
VPS16-201ENST00000380443 SUPT7LO94864 414 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 FGF19O95750 216 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 ESR1P03372 595 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 HMGCLP35914 325 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 VHLP40337 213 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 AP2B1P63010 937 aa23.01■■□□□ 1.27
VPS16-201ENST00000380443 HTRA4P83105 476 aaPredicted RBP23.01■■□□□ 1.27
VPS16-201ENST00000380443 CACNG1Q06432 222 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms