RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 KIFC1Q9BW19 673 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 RHOJQ9H4E5 214 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 SCUBE2Q9NQ36 999 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 BATF3Q9NR55 127 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 MTRRQ9UBK8 725 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 RAD54BQ9Y620 910 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 NRG2O14511 850 aaPredicted RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 PER2O15055 1255 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 GOT2P00505 430 aaKnown RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 GNRH1P01148 92 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 SERPINE1P05121 402 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 MMP2P08253 660 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 ALPIP09923 528 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 EPB42P16452 691 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 CD9P21926 228 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 CNTFP26441 200 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 NME5P56597 212 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 ABCE1P61221 599 aaKnown RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 DLG1Q12959 904 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 TUBA3CQ13748 450 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 ZRANB3Q5FWF4 1079 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 ARL13AQ5H913 290 aaPredicted RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 POMZP3Q6PJE2 187 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 CORO6Q6QEF8 472 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 NAT16Q8N8M0 369 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 TDRD5Q8NAT2 981 aaKnown RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 KCT2Q8NC54 265 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 TRIM43Q96BQ3 446 aaPredicted RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 APOL5Q9BWW9 433 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 CXXC1Q9P0U4 656 aaPredicted RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 CLEC4EQ9ULY5 219 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 TSC2P49815 1807 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 GREB1Q4ZG55 1949 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 HEATR9A2RTY3 570 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 IQCF5A8MTL0 148 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 JUNP05412 331 aaKnown RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 CNPP09543 421 aaKnown RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 SOX11P35716 441 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 CCNFP41002 786 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 NDST2P52849 883 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 EPHB3P54753 998 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 SLC9B1Q4ZJI4 515 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 MSANTD2Q6P1R3 559 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 GLT6D1Q7Z4J2 308 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 GOLM1Q8NBJ4 401 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 MAPK15Q8TD08 544 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 SLC7A6OSQ96CW6 309 aaPredicted RBP10.81□□□□□ -0.68
NEDD9-201ENST00000379433 NSMCE3Q96MG7 304 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 MIPEPQ99797 713 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 WWP1Q9H0M0 922 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 COG4Q9H9E3 785 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 PREBQ9HCU5 417 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 ATG2BQ96BY7 2078 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 A0A0C4DFX4 3053 aa10.81□□□□□ -0.68
NEDD9-201ENST00000379433 SPEGQ15772 3267 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 F5P12259 2224 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 CCDC162PA2VCL2 907 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 CFLARO15519 480 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 SORBS2O94875 1100 aaKnown RBP10.8□□□□□ -0.68
NEDD9-201ENST00000379433 CXCL14O95715 111 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 RAB10P61026 200 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 RABGAP1LQ5R372 815 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 TSTD2Q5T7W7 516 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 SLC8B1Q6J4K2 584 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 POTEHQ6S545 545 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 KDELC1Q6UW63 502 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 RGS9BPQ6ZS82 235 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 CAMK1DQ8IU85 385 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 CENPLQ8N0S6 344 aaPredicted RBP10.8□□□□□ -0.68
NEDD9-201ENST00000379433 OR13J1Q8NGT2 312 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 ARRDC2Q8TBH0 407 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 ING5Q8WYH8 240 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 TOP1MTQ969P6 601 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 NSL1Q96IY1 281 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 SPG21Q9NZD8 308 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 CFAP97Q9P2B7 532 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 OGDHLQ9ULD0 1010 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 PLA2G4CQ9UP65 541 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 LRRC14BA6NHZ5 514 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 TRIM13O60858 407 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 PDE5AO76074 875 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 SOD2P04179 222 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 KCNA5P22460 613 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 MTHFRP42898 656 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 ARCN1P48444 511 aaKnown RBP10.8□□□□□ -0.68
NEDD9-201ENST00000379433 RHOAP61586 193 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 RALGDSQ12967 914 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 FAM20CQ8IXL6 584 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 BBS5Q8N3I7 341 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 PHTF2Q8N3S3 785 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 OR52B2Q96RD2 323 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 POMKQ9H5K3 350 aa10.8□□□□□ -0.68
NEDD9-201ENST00000379433 AFF4Q9UHB7 1163 aaKnown RBP10.8□□□□□ -0.68
NEDD9-201ENST00000379433 C9JVG2 144 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 INSIG1O15503 277 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 OR1I1O60431 355 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 LRG1P02750 347 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 ADRA1AP35348 466 aa10.79□□□□□ -0.68
NEDD9-201ENST00000379433 ZNF135P52742 658 aaPredicted RBP10.79□□□□□ -0.68
NEDD9-201ENST00000379433 CDKN2DP55273 166 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms